RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 PAGE3Q5JUK9 113 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 SSX8Q7RTT4 187 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 AAED1Q7RTV5 226 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 MSRB3Q8IXL7 192 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 C10orf111Q8N326 155 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 ZIC4Q8N9L1 334 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 OR9K2Q8NGE7 335 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 C3orf49Q96BT1 292 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 SPDL1Q96EA4 605 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 TRAF4Q9BUZ4 470 aaPredicted RBP18.19■□□□□ 0.5
SDCBP-209ENST00000522243 ARMC7Q9H6L4 198 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 A4GALTQ9NPC4 353 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 AQP7P3A6NL99 342 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 C5orf58C9J3I9 102 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 PDLIM1O00151 329 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 BMP2P12643 396 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 PCSK6P29122 969 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 MRPL19P49406 292 aaKnown RBP18.18■□□□□ 0.5
SDCBP-209ENST00000522243 ZSWIM7Q19AV6 140 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 C1orf140Q5VVS0 124 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 TMEM225Q6GV28 225 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 OR7E24Q6IFN5 339 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 BLOC1S3Q6QNY0 202 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 SLC22A25Q6T423 547 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 TMEM108Q6UXF1 575 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 WDR31Q8NA23 367 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 MAPK1IP1LQ8NDC0 245 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 NFKBIDQ8NI38 313 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 BBS10Q8TAM1 723 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 DYDC1Q8WWB3 177 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 TMEM45BQ96B21 275 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 CCDC28BQ9BUN5 200 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 RSPO3Q9BXY4 272 aaPredicted RBP18.18■□□□□ 0.5
SDCBP-209ENST00000522243 ALG2Q9H553 416 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 BCL2L10Q9HD36 194 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 GDF2Q9UK05 429 aaPredicted RBP18.18■□□□□ 0.5
SDCBP-209ENST00000522243 POU2F3Q9UKI9 436 aa18.18■□□□□ 0.5
SDCBP-209ENST00000522243 E7EQL1 145 aa18.17■□□□□ 0.5
SDCBP-209ENST00000522243 CDH2P19022 906 aaPredicted RBP18.17■□□□□ 0.5
SDCBP-209ENST00000522243 PTAFRP25105 342 aa18.17■□□□□ 0.5
SDCBP-209ENST00000522243 CD40P25942 277 aa18.17■□□□□ 0.5
SDCBP-209ENST00000522243 ACVR1BP36896 505 aa18.17■□□□□ 0.5
SDCBP-209ENST00000522243 SLC25A3Q00325 362 aa18.17■□□□□ 0.5
SDCBP-209ENST00000522243 AGKQ53H12 422 aa18.17■□□□□ 0.5
SDCBP-209ENST00000522243 LRIF1Q5T3J3 769 aa18.17■□□□□ 0.5
SDCBP-209ENST00000522243 KLHL17Q6TDP4 642 aa18.17■□□□□ 0.5
SDCBP-209ENST00000522243 SF3B5Q9BWJ5 86 aaKnown RBP18.17■□□□□ 0.5
SDCBP-209ENST00000522243 VAPAQ9P0L0 249 aa18.17■□□□□ 0.5
SDCBP-209ENST00000522243 DCTN4Q9UJW0 460 aa18.17■□□□□ 0.5
SDCBP-209ENST00000522243 MGAT4BQ9UQ53 548 aa18.17■□□□□ 0.5
SDCBP-209ENST00000522243 TMEM229AB2RXF0 380 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 RNF223E7ERA6 249 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 AHSA1O95433 338 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 IGHV4-39P01824 125 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 ARAFP10398 606 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 P2RY4P51582 365 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 GCNT6Q5T4J0 391 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 PRAMEF8Q5VWM4 474 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 PRAMEF7Q5VXH5 474 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 B3GLCTQ6Y288 498 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 SLC25A36Q96CQ1 311 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 THOC1Q96FV9 657 aaKnown RBP18.16■□□□□ 0.5
SDCBP-209ENST00000522243 AMBRA1Q9C0C7 1298 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 SLCO5A1Q9H2Y9 848 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 SLC52A3Q9NQ40 469 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 SLC17A5Q9NRA2 495 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 FAIMQ9NVQ4 179 aa18.16■□□□□ 0.5
SDCBP-209ENST00000522243 NPIPB7O75200 414 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 ETS2P15036 469 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 MPGP29372 298 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 RPS5P46782 204 aaKnown RBP18.15■□□□□ 0.5
SDCBP-209ENST00000522243 LGALS3BPQ08380 585 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 AGAP6Q5VW22 663 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 DTX2Q86UW9 622 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 COMTD1Q86VU5 262 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 KDM8Q8N371 416 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 STK35Q8TDR2 534 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 RADILQ96JH8 1075 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 PRR14Q9BWN1 585 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 RPS6KB2Q9UBS0 482 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 PRDM4Q9UKN5 801 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 B3GALT5Q9Y2C3 310 aa18.15■□□□□ 0.5
SDCBP-209ENST00000522243 HEATR1Q9H583 2144 aaKnown RBP18.14■□□□□ 0.5
SDCBP-209ENST00000522243 ELOA3DA6NLF2 546 aaPredicted RBP18.14■□□□□ 0.49
SDCBP-209ENST00000522243 INAFM1C9JVW0 142 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 TPST1O60507 370 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 KRT33AO76009 404 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 SELENOPP49908 381 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 CDK6Q00534 326 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 TGFBR3Q03167 851 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 EGR4Q05215 589 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 ELOA3BQ3SY89 546 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 GLIPR1L2Q4G1C9 344 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 CREB3L2Q70SY1 520 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 POMGNT2Q8NAT1 580 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 C1orf162Q8NEQ5 155 aaPredicted RBP18.14■□□□□ 0.49
SDCBP-209ENST00000522243 ELOA3Q8NG57 546 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 HS6ST2Q96MM7 605 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 DHRS9Q9BPW9 319 aa18.14■□□□□ 0.49
SDCBP-209ENST00000522243 PTDSS2Q9BVG9 487 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms