RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 ELK1P19419 428 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 ATP6V1B2P21281 511 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 GABRR1P24046 479 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 CALCRP30988 508 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 RDXP35241 583 aaKnown RBP3.29□□□□□ -1.88
PTPN12-214ENST00000520947 UGT1A5P35504 534 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 RPL13AP40429 203 aaKnown RBP3.29□□□□□ -1.88
PTPN12-214ENST00000520947 QARSP47897 775 aaKnown RBP3.29□□□□□ -1.88
PTPN12-214ENST00000520947 KLK7P49862 253 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 APOC4P55056 127 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 PKNOX1P55347 436 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 CUL2Q13617 745 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 IMMTQ16891 758 aaKnown RBP3.29□□□□□ -1.88
PTPN12-214ENST00000520947 CARD16Q5EG05 197 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 DMRTC1Q5HYR2 192 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 METAP1DQ6UB28 335 aaPredicted RBP3.29□□□□□ -1.88
PTPN12-214ENST00000520947 RUFY3Q7L099 469 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 CCDC65Q8IXS2 484 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 LRRC75A-AS1Q8N1F1 130 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 ZNF740Q8NDX6 193 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 SETD7Q8WTS6 366 aaKnown RBP3.29□□□□□ -1.88
PTPN12-214ENST00000520947 FGF11Q92914 225 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 UBE2E3Q969T4 207 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 NT5C3BQ969T7 300 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 TIMD4Q96H15 378 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 RBM14Q96PK6 669 aaKnown RBP3.29□□□□□ -1.88
PTPN12-214ENST00000520947 MTMR9Q96QG7 549 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 RNF2Q99496 336 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 GON7Q9BXV9 100 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 RAB34Q9BZG1 259 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 NARFLQ9H6Q4 476 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 SH2D2AQ9NP31 389 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 POLE4Q9NR33 117 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 KIF25Q9UIL4 384 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 BTNL2Q9UIR0 455 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 STAP1Q9ULZ2 295 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 TDRD6O60522 2096 aaKnown RBP3.29□□□□□ -1.88
PTPN12-214ENST00000520947 ATP10AO60312 1499 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 HELTA6NFD8 242 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 E9PBE3 544 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 POLR2DO15514 142 aaKnown RBP3.28□□□□□ -1.88
PTPN12-214ENST00000520947 MBTPS2O43462 519 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 RAMP3O60896 148 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 SUPT7LO94864 414 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 SNAPINO95295 136 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 ZNF853P0CG23 659 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 DBTP11182 482 aaKnown RBP3.28□□□□□ -1.88
PTPN12-214ENST00000520947 GNA11P29992 359 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 SHMT2P34897 504 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 MAGEA8P43361 318 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 DUSP3P51452 185 aaPredicted RBP3.28□□□□□ -1.88
PTPN12-214ENST00000520947 TLE4Q04727 773 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 ORC2Q13416 577 aaPredicted RBP3.28□□□□□ -1.88
PTPN12-214ENST00000520947 VGLL4Q14135 290 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 ZNF630Q2M218 657 aaPredicted RBP3.28□□□□□ -1.88
PTPN12-214ENST00000520947 BCL7AQ4VC05 210 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 C1orf146Q5VVC0 180 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 PGAP1Q75T13 922 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 DHDDSQ86SQ9 333 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 NBPF5PQ86XG9 351 aaPredicted RBP3.28□□□□□ -1.88
PTPN12-214ENST00000520947 SLC22A9Q8IVM8 553 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 C6orf223Q8N319 242 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 BBS5Q8N3I7 341 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 FTMTQ8N4E7 242 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 CCDC71LQ8N9Z2 235 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 OR4K14Q8NGD5 310 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 RPUSD4Q96CM3 377 aaKnown RBP3.28□□□□□ -1.88
PTPN12-214ENST00000520947 PAGE5Q96GU1 130 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 SEC22AQ96IW7 307 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 RPRD1AQ96P16 312 aaPredicted RBP3.28□□□□□ -1.88
PTPN12-214ENST00000520947 PARD6BQ9BYG5 372 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 ASB8Q9H765 288 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 SUDS3Q9H7L9 328 aaPredicted RBP3.28□□□□□ -1.88
PTPN12-214ENST00000520947 YY1AP1Q9H869 796 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 FOLH1BQ9HBA9 442 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 HOXC10Q9NYD6 342 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 ADAM28Q9UKQ2 775 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 COPS3Q9UNS2 423 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 V9GY05 133 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 ARHGAP23Q9P227 1491 aa3.28□□□□□ -1.88
PTPN12-214ENST00000520947 SH3TC1Q8TE82 1336 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 IGHV3OR16-13A0A075B7E8 117 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 IGHV1OR21-1A0A087WYE8 117 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 A6NIZ1 184 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 GFYI3L273 518 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 HIP1O00291 1037 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 ABCD4O14678 606 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 NBR2O15453 112 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 ERLIN1O75477 346 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 BBOX1O75936 387 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 IGLV1-47P01700 117 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 HPNP05981 417 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 MGMTP16455 207 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 CXCR2P25025 360 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 DDOSTP39656 456 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 ATP1B3P54709 279 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 RAP1BP61224 184 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 TGFBR3Q03167 851 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 GBE1Q04446 702 aa3.27□□□□□ -1.89
PTPN12-214ENST00000520947 SSX2Q16385 188 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms