RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 UBE2V2Q15819 145 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 MRPL23Q16540 153 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZSCAN26Q16670 478 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 DUSP5Q16690 384 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 NDUFA9Q16795 377 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 DGUOKQ16854 277 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ISXQ2M1V0 245 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF284Q2VY69 593 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 HLA-BQ31612 363 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PGGHGQ32M88 737 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC25A52Q3SY17 297 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM106AQ4KMX7 169 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 DNAL1Q4LDG9 190 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM74A3Q4VXF1 159 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 RFTN2Q52LD8 501 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TP53I3Q53FA7 332 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PHLDA2Q53GA4 152 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 AKIRIN2Q53H80 203 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 EIPR1Q53HC9 387 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 C5orf47Q569G3 176 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 AWAT1Q58HT5 328 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 DMRTC1Q5HYR2 192 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CDKL4Q5MAI5 379 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TCHHL1Q5QJ38 904 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 DCAF10Q5QP82 559 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TPRG1LQ5T0D9 272 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 UTF1Q5T230 341 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 C6orf183Q5T699 404 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ATP1A1-AS1Q5TC04 95 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF658Q5TYW1 1059 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR2G6Q5TZ20 316 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ASPHD1Q5U4P2 390 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF691Q5VV52 312 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 GPR107Q5VW38 600 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 MFSD14CQ5VZR4 134 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 RESP18Q5W5W9 173 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC35E4Q6ICL7 350 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR8G2PQ6IF36 304 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ADNP2Q6IQ32 1131 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRR5LQ6MZQ0 368 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ACSM5Q6NUN0 579 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 NEPROQ6NW34 567 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 STEAP1BQ6NZ63 245 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 C1orf94Q6P1W5 598 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAHD2BQ6P2I3 314 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM173BQ6P4H8 233 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 EMBQ6PCB8 327 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PAQR6Q6TCH4 344 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SASS6Q6UVJ0 657 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ATRAIDQ6UW56 229 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ENPP6Q6UWR7 440 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CLEC18BQ6UXF7 455 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CD300LGQ6UXG3 332 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM151BQ6UXP7 276 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 LRRC31Q6UY01 552 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ASCL4Q6XD76 172 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 STAC2Q6ZMT1 411 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 LEKR1Q6ZMV7 388 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 Q6ZRG5 221 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF621Q6ZSS3 439 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 Q6ZSV7 163 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 LANCL3Q6ZV70 420 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 STOX1Q6ZVD7 989 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ASB18Q6ZVZ8 466 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CYS1Q717R9 158 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 Q71RC1 249 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 GDPD3Q7L5L3 318 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SSX7Q7RTT5 188 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SSX6Q7RTT6 188 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 C16orf82Q7Z2V1 217 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PAGE2Q7Z2X7 111 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR2W3Q7Z3T1 314 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PIWIL4Q7Z3Z4 852 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 HSD11B1LQ7Z5J1 315 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CEACAM19Q7Z692 300 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 C5orf24Q7Z6I8 188 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TSEN54Q7Z6J9 526 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM135Q86UB9 458 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF329Q86UD4 541 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF546Q86UE3 836 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 GTSCR1Q86UQ5 136 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ITIH5Q86UX2 942 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ERICH1Q86X53 443 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CATSPERDQ86XM0 798 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNF130Q86XS8 419 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CACUL1Q86Y37 369 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 HPS6Q86YV9 775 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 APOBEC3FQ8IUX4 373 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ITPRIPQ8IWB1 547 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4N5Q8IXE1 308 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 NELFCDQ8IXH7 590 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC35F2Q8IXU6 374 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZC3H3Q8IXZ2 948 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF100Q8IYN0 542 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC22A15Q8IZD6 547 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SELENOHQ8IZQ5 122 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 IQCKQ8N0W5 287 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 LSMEM2Q8N112 164 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 EID3Q8N140 333 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC39A11Q8N1S5 342 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms