RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 HAS2Q92819 552 aa-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 ART4Q93070 314 aa-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 TM4SF18Q96CE8 201 aa-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 BSCL2Q96G97 398 aaPredicted RBP-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 TMEM246Q9BRR3 403 aa-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 SLC25A23Q9BV35 468 aa-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 MRPL37Q9BZE1 423 aaKnown RBP-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 GHITMQ9H3K2 345 aa-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 SYNDIG1Q9H7V2 258 aa-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 CDH7Q9ULB5 785 aa-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 PCDHGB4Q9UN71 923 aa-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 YARS2Q9Y2Z4 477 aaKnown RBP-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 MRPS2Q9Y399 296 aaKnown RBP-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 BAZ2AQ9UIF9 1905 aaKnown RBP-1.39□□□□□ -2.63
SNORA40.13-201ENST00000516379 COL4A2P08572 1712 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 VWA8A3KMH1 1905 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 SIGLEC16A6NMB1 481 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 ANXA2P2A6NMY6 339 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 PP2D1A8MPX8 630 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 H3BMH7 237 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 IFRD1O00458 451 aaPredicted RBP-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 PORP16435 677 aaPredicted RBP-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 CPT2P23786 658 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 STIP1P31948 543 aaKnown RBP-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 CD80P33681 288 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 MAGEA3P43357 314 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 MAGEA5P43359 124 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 GNPDA1P46926 289 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 FGF8P55075 233 aaPredicted RBP-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 HERV-K104P63124 156 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 TFDP1Q14186 410 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 TSC22D1Q15714 1073 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 ATP6AP1Q15904 470 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 ANKRD20A8PQ5CZ79 823 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 BEND6Q5SZJ8 279 aaPredicted RBP-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 OR8G2PQ6IF36 304 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 CD164L2Q6UWJ8 174 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 AQP12AQ8IXF9 295 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 STPG2Q8N412 459 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 FGF14Q92915 247 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 TBL1YQ9BQ87 522 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 ECSITQ9BQ95 431 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 DUSP16Q9BY84 665 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 ZNF286AQ9HBT8 521 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 DDX19AQ9NUU7 478 aaKnown RBP-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 SLC17A7Q9P2U7 560 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 ERVK-18Q9QC07 812 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 COMMD10Q9Y6G5 202 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 FAM169AQ9Y6X4 670 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 CRB1P82279 1406 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 SH3TC1Q8TE82 1336 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 PASKQ96RG2 1323 aa-1.4□□□□□ -2.63
SNORA40.13-201ENST00000516379 IGHV1OR21-1A0A087WYE8 117 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 IGHV3-74A0A0B4J1X5 117 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 IGKV1-6A0A0C4DH72 117 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 MFNGO00587 321 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 ARPC1BO15143 372 aaKnown RBP-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 RPN1P04843 607 aaKnown RBP-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 CENPBP07199 599 aaPredicted RBP-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 SMIM10L1P0DMW3 83 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 TBXA2RP21731 343 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 NPY2RP49146 381 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 CYB561P49447 251 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 NOVA1P51513 510 aaKnown RBP-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 CCL23P55773 120 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 ZP4Q12836 540 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 BIKQ13323 160 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 SLMAPQ14BN4 828 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 HYAL4Q2M3T9 481 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 NSUN5P1Q3KNT7 163 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 BMP2KLQ5H9B9 411 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 OR2A2Q6IF42 318 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 PLBD1Q6P4A8 553 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 PODNL1Q6PEZ8 512 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 TBPL2Q6SJ96 375 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 C1orf186Q6ZWK4 172 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 CALHM1Q8IU99 346 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 KLHDC8AQ8IYD2 350 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 ZNF101Q8IZC7 436 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 CCAR2Q8N163 923 aaKnown RBP-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 CENPSQ8N2Z9 138 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 LRRC43Q8N309 656 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 SVOPLQ8N434 492 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 FLYWCH2Q96CP2 140 aaKnown RBP-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 SMIM10Q96HG1 83 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 AKR1E2Q96JD6 320 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 ALDH8A1Q9H2A2 487 aaPredicted RBP-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 ZSCAN16Q9H4T2 348 aaPredicted RBP-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 QPCTLQ9NXS2 382 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 MIOXQ9UGB7 285 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 XPO7Q9UIA9 1087 aaKnown RBP-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 IKZF2Q9UKS7 526 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 OR10H1Q9Y4A9 318 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 FAM208BQ5VWN6 2430 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 TSPOAP1O95153 1857 aa-1.41□□□□□ -2.64
SNORA40.13-201ENST00000516379 TNXBP22105 4242 aa-1.42□□□□□ -2.64
SNORA40.13-201ENST00000516379 NSD2O96028 1365 aa-1.42□□□□□ -2.64
SNORA40.13-201ENST00000516379 URADA6NGE7 173 aa-1.42□□□□□ -2.64
SNORA40.13-201ENST00000516379 JAK2O60674 1132 aa-1.42□□□□□ -2.64
SNORA40.13-201ENST00000516379 STK17BO94768 372 aa-1.42□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms