RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 REEP4Q9H6H4 257 aa3.38□□□□□ -1.87
HMGCS1-207ENST00000514610 RNF167Q9H6Y7 350 aa3.38□□□□□ -1.87
HMGCS1-207ENST00000514610 MTRF1LQ9UGC7 380 aaKnown RBP3.38□□□□□ -1.87
HMGCS1-207ENST00000514610 COPS3Q9UNS2 423 aa3.38□□□□□ -1.87
HMGCS1-207ENST00000514610 PRG3Q9Y2Y8 225 aaPredicted RBP3.38□□□□□ -1.87
HMGCS1-207ENST00000514610 RLFQ13129 1914 aa3.38□□□□□ -1.87
HMGCS1-207ENST00000514610 TCRBV9S1A1TA0A576 114 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 HIP1O00291 1037 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 FAM189A1O60320 539 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 UGT1A9O60656 530 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 HSMCR30P0CW71 290 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 CCDC130P13994 396 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 PTMSP20962 102 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 GNA11P29992 359 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 RDXP35241 583 aaKnown RBP3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 RFC4P35249 363 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 KIR2DS4P43632 304 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 CCT3P49368 545 aaKnown RBP3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 KPNA2P52292 529 aaKnown RBP3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 ACTR1AP61163 376 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 ARFRP1Q13795 201 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 PDK3Q15120 406 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 TIGD3Q6B0B8 471 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 PMF1Q6P1K2 205 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 TMIGD1Q6UXZ0 262 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 DHDDSQ86SQ9 333 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 SLC26A11Q86WA9 606 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 RALGPS2Q86X27 583 aaPredicted RBP3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 CCDC65Q8IXS2 484 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 PNKDQ8N490 385 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 OR10G3Q8NGC4 313 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 FAM110BQ8TC76 370 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 MAIP1Q8WWC4 291 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 ARPC1AQ92747 370 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 SLC41A3Q96GZ6 507 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 TIMD4Q96H15 378 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 KCNA7Q96RP8 456 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 NAT9Q9BTE0 207 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 PARD6BQ9BYG5 372 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 VCX2Q9H322 139 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 SLC25A22Q9H936 323 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 THUMPD1Q9NXG2 353 aaKnown RBP3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 CLEC4AQ9UMR7 237 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 TRAF3IP3Q9Y228 551 aa3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 RPL36Q9Y3U8 105 aaKnown RBP3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 RPAP1Q9BWH6 1393 aaPredicted RBP3.37□□□□□ -1.87
HMGCS1-207ENST00000514610 ATP10AO60312 1499 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 NSG1A0A0A6YYJ2 146 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 HSD17B6O14756 317 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 NBR2O15453 112 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 POLR2DO15514 142 aaKnown RBP3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 ZNF208O43345 1280 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 SCGNO76038 276 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 INSP01308 110 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 P04436 131 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 CHTF8P0CG12 524 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 MDKP21741 143 aaPredicted RBP3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 PRPHP41219 470 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 CRYBB1P53674 252 aaPredicted RBP3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 FGL1Q08830 312 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 UNC119Q13432 240 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 OXA1LQ15070 435 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 PARP15Q460N3 678 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 CTRB2Q6GPI1 263 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 ACP7Q6ZNF0 438 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 RGS9BPQ6ZS82 235 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 MFSD6LQ8IWD5 586 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 ZNF433Q8N7K0 673 aaPredicted RBP3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 OR9G1Q8NH87 305 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 SCFD1Q8WVM8 642 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 UCN3Q969E3 161 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 RBM14Q96PK6 669 aaKnown RBP3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 NRTNQ99748 197 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 P2RY13Q9BPV8 354 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 POLE4Q9NR33 117 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 SEC14L3Q9UDX4 400 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 ADAM28Q9UKQ2 775 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 CDH9Q9ULB4 789 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 LTBP1Q14766 1721 aa3.36□□□□□ -1.87
HMGCS1-207ENST00000514610 KIR2DL5BA0A0G2JN68 375 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 KIR2DL5BA0A0G2JPC4 375 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 MED7O43513 233 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 OXSR1O95747 527 aaPredicted RBP3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 MOSP00540 346 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 IL1BP01584 269 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 NR2C1P13056 603 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 PRDX3P30048 256 aaKnown RBP3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 CCR1P32246 355 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 NUDT1P36639 197 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 MAGEA8P43361 318 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 VDAC2P45880 294 aaPredicted RBP3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 GSSP48637 474 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 ATP1B3P54709 279 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 DLX1P56177 255 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 TAS2R19P59542 299 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 TNFRSF17Q02223 184 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 ASPHQ12797 758 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 PLD1Q13393 1074 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 MICBQ29980 383 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 SAMD4BQ5PRF9 694 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms