RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 SDHAF2Q9NX18 166 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 DNAJC27Q9NZQ0 273 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 HEATR5BQ9P2D3 2071 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 PI4KAP42356 2102 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 A0A0A6YYD5 115 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 TRBC2A0A5B9 178 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 ANKRD20A5PA0PJZ0 165 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 OR6C74A6NCV1 312 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 NCR1O76036 304 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 RGS11O94810 467 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 OPN1MWP04001 364 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 S100A9P06702 114 aaKnown RBP6.79□□□□□ -1.32
CLIP1-205ENST00000514271 CD63P08962 238 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 GIPP09681 153 aaPredicted RBP6.79□□□□□ -1.32
CLIP1-205ENST00000514271 OPN1MW2P0DN77 364 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 OPN1MW3P0DN78 364 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 GABRA1P14867 456 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 FPR3P25089 353 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 FEN1P39748 380 aaKnown RBP6.79□□□□□ -1.32
CLIP1-205ENST00000514271 PCP4P48539 62 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 CTSCP53634 463 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 ATP12AP54707 1039 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 NRG3P56975 720 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 HHEXQ03014 270 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 TSPAN31Q12999 210 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 TAB1Q15750 504 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 CCSMST1Q4G0I0 132 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 FAM166AQ6J272 317 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 REEP3Q6NUK4 255 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 TMEM64Q6YI46 380 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 SLC35F3Q8IY50 421 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 ABCA7Q8IZY2 2146 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 C10orf53Q8N6V4 93 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 CAMKVQ8NCB2 501 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 SELENOMQ8WWX9 145 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 NXPE2Q96DL1 559 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 NRSN2Q9GZP1 204 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 FN3KQ9H479 309 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 KIF17Q9P2E2 1029 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 PURGQ9UJV8 347 aaKnown RBP6.79□□□□□ -1.32
CLIP1-205ENST00000514271 ADAM30Q9UKF2 790 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 SLC22A14Q9Y267 594 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 PRELID3BQ9Y3B1 194 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 SZT2Q5T011 3432 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 DNAH14Q0VDD8 3507 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 KRBOX1C9JBD0 128 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 COL9A2Q14055 689 aaPredicted RBP6.79□□□□□ -1.32
CLIP1-205ENST00000514271 MPPED2Q15777 294 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 LY6G6FQ5SQ64 297 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 MRM1Q6IN84 353 aaKnown RBP6.79□□□□□ -1.32
CLIP1-205ENST00000514271 TCEAL6Q6IPX3 200 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 TMEM71Q6P5X7 295 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 COMMD6Q7Z4G1 85 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 THOC6Q86W42 341 aaKnown RBP6.79□□□□□ -1.32
CLIP1-205ENST00000514271 RNF113BQ8IZP6 322 aaKnown RBP6.79□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF527Q8NB42 609 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 OR5M9Q8NGP3 310 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 OR2L8Q8NGY9 312 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 TCEAL3Q969E4 200 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 GFM1Q96RP9 751 aaKnown RBP6.79□□□□□ -1.32
CLIP1-205ENST00000514271 PELOQ9BRX2 385 aaKnown RBP6.79□□□□□ -1.32
CLIP1-205ENST00000514271 FAIM2Q9BWQ8 316 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 ISG20L2Q9H9L3 353 aaKnown RBP6.79□□□□□ -1.32
CLIP1-205ENST00000514271 PDE7BQ9NP56 450 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 NPFFR2Q9Y5X5 522 aa6.79□□□□□ -1.32
CLIP1-205ENST00000514271 CCDC187A0A096LP49 1063 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 A0A1W2PPV9 198 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 SNRPGP15A8MWD9 76 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 UBL3O95164 117 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 SAGP10523 405 aaPredicted RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 PRKAR1AP10644 381 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 KRT33BQ14525 404 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 HLXQ14774 488 aaPredicted RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 CLVS2Q5SYC1 327 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 CPTPQ5TA50 214 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF321PQ8N8H1 164 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 SLC37A3Q8NCC5 494 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 OR6K3Q8NGY3 331 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 LYPD6BQ8NI32 183 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 TM4SF18Q96CE8 201 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 DIRAS2Q96HU8 199 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 SLC6A16Q9GZN6 736 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 IL21RQ9HBE5 538 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 UBQLN2Q9UHD9 624 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 NINQ8N4C6 2090 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 ZDBF2Q9HCK1 2354 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 TTC28Q96AY4 2481 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 A0A087WUU8 490 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 LY6G6EA0A0G2JKS1 128 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 C2orf74A8MZ97 194 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 C4orf51C9J302 202 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 DXOO77932 396 aaKnown RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 C6orf47O95873 294 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 HIST1H2ABP04908 130 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 FTH1P19P0C7X4 201 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 ANXA3P12429 323 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 LYL1P12980 280 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 AZGP1P25311 298 aaKnown RBP6.78□□□□□ -1.32
CLIP1-205ENST00000514271 CAPZBP47756 277 aa6.78□□□□□ -1.32
CLIP1-205ENST00000514271 PITPNBP48739 271 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms