RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	ZNF440	Q8IYI8	595 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	KATNAL2	Q8IYT4	538 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	OR4K14	Q8NGD5	310 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SETD7	Q8WTS6	366 aa	Known RBP	3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	STMN2	Q93045	179 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	KCNA7	Q96RP8	456 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SOST	Q9BQB4	213 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	FANCE	Q9HB96	536 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	INPP5E	Q9NRR6	644 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	HOXC10	Q9NYD6	342 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ZNF581	Q9P0T4	197 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	RSPH14	Q9UHP6	348 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	STAP1	Q9ULZ2	295 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	CHTOP	Q9Y3Y2	248 aa	Known RBP	3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PHLPP2	Q6ZVD8	1323 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	RLF	Q13129	1914 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	RAI1	Q7Z5J4	1906 aa	Predicted RBP	3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	LRRK1	Q38SD2	2015 aa		3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PHF3	Q92576	2039 aa	Known RBP	3.87	□□□□□ -1.79
CALCOCO2-222	ENST00000514006		A0A1B0GTQ1	180 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	TUBAL3	A6NHL2	446 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SUPT3H	B4E1H0	165 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	DLGAP1	O14490	977 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	CLOCK	O15516	846 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PHF1	O43189	567 aa	Predicted RBP	3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	OR2J3	O76001	311 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	STAMBP	O95630	424 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	LGI1	O95970	557 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	CT62	P0C5K7	136 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	RBMY1C	P0DJD4	496 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	NPR2	P20594	1047 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	TNNT2	P45379	298 aa	Predicted RBP	3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	RAB9A	P51151	201 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SLC25A1	P53007	311 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	GPRC6A	Q5T6X5	926 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ACOT7L	Q6ZUV0	252 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ARC	Q7LC44	396 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SSX9	Q7RTT3	188 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	VRK2	Q86Y07	508 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SKA3	Q8IX90	412 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	FTMT	Q8N4E7	242 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	B3GNT7	Q8NFL0	401 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	OR52K1	Q8NGK4	314 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	GPR151	Q8TDV0	419 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ACMSD	Q8TDX5	336 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	FGF11	Q92914	225 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	RANBP9	Q96S59	729 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	KLHDC3	Q9BQ90	382 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	APOL2	Q9BQE5	337 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	BCL7B	Q9BQE9	202 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	MDFIC	Q9P1T7	246 aa		3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PACSIN2	Q9UNF0	486 aa	Predicted RBP	3.86	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	LOC110117498-PIK3R3	F6TDL0	507 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	BOLA2-SMG1P6	H3BVE0	249 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	MBTPS2	O43462	519 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	POLR2M	P0CAP2	368 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	UBTFL1	P0CB47	393 aa	Predicted RBP	3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	IGLL1	P15814	213 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ZNF43	P17038	809 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	HOXB6	P17509	224 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PRDX3	P30048	256 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	RRM2	P31350	389 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SHMT2	P34897	504 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	HSD17B2	P37059	387 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	VHL	P40337	213 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	YAP1	P46937	504 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	GSS	P48637	474 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	GPM6A	P51674	278 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	CXCL6	P80162	114 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	TLE4	Q04727	773 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SPAG1	Q07617	926 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	MRPL23	Q16540	153 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	AANAT	Q16613	207 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	NSUN5P1	Q3KNT7	163 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	KLHL22	Q53GT1	634 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PAN3	Q58A45	887 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	LCE1A	Q5T7P2	110 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	TTC19	Q6DKK2	380 aa	Predicted RBP	3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	TMEM53	Q6P2H8	277 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SASS6	Q6UVJ0	657 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	NIPA1	Q7RTP0	329 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SCD5	Q86SK9	330 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	C17orf82	Q86X59	251 aa	Predicted RBP	3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	MFSD6L	Q8IWD5	586 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	POM121L12	Q8N7R1	296 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ZNF321P	Q8N8H1	164 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ACOT4	Q8N9L9	421 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PLPPR1	Q8TBJ4	325 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	AGAP11	Q8TF27	550 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PYROXD1	Q8WU10	500 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	KIFAP3	Q92845	792 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PAGE5	Q96GU1	130 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PGLYRP4	Q96LB8	373 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	CFAP53	Q96M91	514 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	MRPL45	Q9BRJ2	306 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	RNF126	Q9BV68	326 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	CLSTN2	Q9H4D0	955 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ISG20L2	Q9H9L3	353 aa	Known RBP	3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	FOLH1B	Q9HBA9	442 aa		3.85	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	MRPL22	Q9NWU5	206 aa	Known RBP	3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms