RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 TEAD1P28347 426 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 FRKP42685 505 aaPredicted RBP8.9□□□□□ -0.99
VCAN-210ENST00000513960 IRF4Q15306 451 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 LTB4RQ15722 352 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 NIPAL3Q6P499 406 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 MTSS1LQ765P7 747 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 UBE3DQ7Z6J8 389 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 SPAG16Q8N0X2 631 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 OR11G2Q8NGC1 345 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 OR52E2Q8NGJ4 325 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 NANPQ8TBE9 248 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 C7orf50Q9BRJ6 194 aaKnown RBP8.9□□□□□ -0.99
VCAN-210ENST00000513960 CRB3Q9BUF7 120 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 TMEM106CQ9BVX2 250 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 PINK1Q9BXM7 581 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 TEX101Q9BY14 249 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.9□□□□□ -0.99
VCAN-210ENST00000513960 PTPRSQ13332 1948 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 LAMA3Q16787 3333 aa8.9□□□□□ -0.99
VCAN-210ENST00000513960 TRAV20A0A0B4J274 112 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 ZNF705EA8MWA4 302 aaPredicted RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 F5H0A9 414 aaPredicted RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 F8W036 122 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 PYCARD-AS1I3L0S3 204 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 CACNB4O00305 520 aaPredicted RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 APODP05090 189 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 ANXA2P07355 339 aaKnown RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 GIPP09681 153 aaPredicted RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 ART1P52961 327 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 PSMD4P55036 377 aaKnown RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 TAS2R43P59537 309 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 BLOC1S1P78537 153 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 MLC1Q15049 377 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 AGBL4Q5VU57 503 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 VASNQ6EMK4 673 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 TANGO2Q6ICL3 276 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 LIN54Q6MZP7 749 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 CBLN2Q8IUK8 224 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 GJD3Q8N144 294 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 BEST3Q8N1M1 668 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 OR2A1Q8NGT9 310 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 SMIM4Q8WVI0 70 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 APOBEC4Q8WW27 367 aaKnown RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 ZNF764Q96H86 408 aaPredicted RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 SEC22AQ96IW7 307 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 OR7D2Q96RA2 312 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 MICU1Q9BPX6 476 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 TMEM231Q9H6L2 316 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 ZNF780BQ9Y6R6 833 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 A0A0A6YYD5 115 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 OR52A4PA6NMU1 304 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 SC5DO75845 299 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 CSNK2A2P19784 350 aaPredicted RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 HACD4Q5VWC8 232 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 ZNF546Q86UE3 836 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 CCDC36Q8IYA8 594 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 OR6V1Q8N148 313 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 BPIFCQ8NFQ6 507 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 MENTQ9BUN1 341 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 ABRACLQ9P1F3 81 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 FARSAQ9Y285 508 aaKnown RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 NOP16Q9Y3C1 178 aaKnown RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 ZNF879B4DU55 563 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 PRSS44E7EML9 344 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 KCNJ13O60928 360 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 RBBP9O75884 186 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 ADH1BP00325 375 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 RD3LP0DJH9 198 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 IFNGR1P15260 489 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 C5AR1P21730 350 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 BMP8BP34820 402 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 PPM1FP49593 454 aaPredicted RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 KLF9Q13886 244 aaPredicted RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 MLF2Q15773 248 aaPredicted RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 MAPK14Q16539 360 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 BMP8AQ7Z5Y6 402 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 RANBP3LQ86VV4 465 aaPredicted RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 OR14C36Q8NHC7 312 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 DNAJA3Q96EY1 480 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 HS6ST2Q96MM7 605 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 TEAD3Q99594 435 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 ENKD1Q9H0I2 346 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 KLHL31Q9H511 634 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 GDE1Q9NZC3 331 aa8.89□□□□□ -0.99
VCAN-210ENST00000513960 MYEF2Q9P2K5 600 aaKnown RBP8.89□□□□□ -0.99
VCAN-210ENST00000513960 C5orf67F2Z3F1 127 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 CCSO14618 274 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 TO15178 435 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 HIST1H1TP22492 207 aaPredicted RBP8.88□□□□□ -0.99
VCAN-210ENST00000513960 FPR3P25089 353 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 MAOBP27338 520 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 THBS2P35442 1172 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 BCL6P41182 706 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 PDX1P52945 283 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 TSSK4Q6SA08 328 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 ZNF793Q6ZN11 406 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 RFLNBQ8N5W9 214 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 ACOT4Q8N9L9 421 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 OR2L8Q8NGY9 312 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 THAP6Q8TBB0 222 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms