RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 MOGAT1Q96PD6 335 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 EVA1AQ9H8M9 152 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 C12orf10Q9HB07 376 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 STOML1Q9UBI4 398 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 MCTS1Q9ULC4 181 aaKnown RBP8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 HDGFL3Q9Y3E1 203 aa8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 USP9XQ93008 2570 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-209ENST00000513818 UTP20O75691 2785 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 DIDO1Q9BTC0 2240 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 DHRS12A0PJE2 317 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 A1L4Q6 167 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 LIPT2A6NK58 231 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 ENO4A6NNW6 628 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 FTCDNL1E5RQL4 147 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 PMS2P2O95744 297 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 LDLRP01130 860 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 TMIGD3P0DMS9 266 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 FUT1P19526 365 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 GRPRP30550 384 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 TRAP1Q12931 704 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 CCNIQ14094 377 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 MTX3Q5HYI7 312 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 RIPPLY2Q5TAB7 128 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 VWA1Q6PCB0 445 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 TTC33Q6PID6 262 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 TBPL2Q6SJ96 375 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 FCRLAQ7L513 359 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 CYP4Z1Q86W10 505 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 ZDHHC21Q8IVQ6 265 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 TMEM99Q8N816 258 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 CNEP1R1Q8N9A8 125 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 PIK3C3Q8NEB9 887 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 OR52J3Q8NH60 311 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 STK35Q8TDR2 534 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 RNF128Q8TEB7 428 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 CANT1Q8WVQ1 401 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 ITLN2Q8WWU7 325 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 RND1Q92730 232 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 RSRC1Q96IZ7 334 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 FNDC11Q9BVV2 318 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 TAPBPLQ9BX59 468 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 RNF122Q9H9V4 155 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 CALHM2Q9HA72 323 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 MEPEQ9NQ76 525 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 C20orf141Q9NUB4 165 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 VNN3Q9NY84 501 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 C6orf203Q9P0P8 240 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 ZNF175Q9Y473 711 aa8.75□□□□□ -1.01
TOPBP1-209ENST00000513818 TRAV36DV7A0A075B6V5 113 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 TRBV4-1A0A0J9YWV2 114 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 A0A1W2PNV4 684 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 NKX2-6A6NCS4 301 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 AQP12BA6NM10 295 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 M0R082 166 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 CIB2O75838 187 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 CH25HO95992 272 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 IL2RAP01589 272 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 BGLAPP02818 100 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 GPIP06744 558 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 H1F0P07305 194 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 BMP5P22003 454 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 EDNRAP25101 427 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 GTF2E2P29084 291 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 RRM2P31350 389 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 CEACAM8P31997 349 aaPredicted RBP8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 GPR4P46093 362 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 RAC3P60763 192 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 CSNK2A1P68400 391 aaPredicted RBP8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 CHRNB3Q05901 458 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 ST3GAL3Q11203 375 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 LAPTM4AQ15012 233 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 SEC23BQ15437 767 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 ZSCAN26Q16670 478 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 FAM98BQ52LJ0 330 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 OTUD3Q5T2D3 398 aaPredicted RBP8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 ABLIM2Q6H8Q1 611 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 TMEM211Q6ICI0 200 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 LINC00114Q6XXX2 140 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 SLC46A3Q7Z3Q1 461 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 MRGPRGQ86SM5 289 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 AQP12AQ8IXF9 295 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 NRMQ8IXM6 262 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 KDM8Q8N371 416 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 FAM26EQ8N5C1 309 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 LRRC17Q8N6Y2 441 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 RELL2Q8NC24 303 aaPredicted RBP8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 ZNF417Q8TAU3 575 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 TMEM239Q8WW34 195 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 SLCO4A1Q96BD0 722 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 ZHX1-C8orf76Q96EF9 292 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 ZNF587Q96SQ5 575 aaPredicted RBP8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 PIP5K1AQ99755 562 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 TM9SF2Q99805 663 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 TMEM43Q9BTV4 400 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 ZNF426Q9BUY5 554 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 POTEKPQ9BYX7 375 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 UCK2Q9BZX2 261 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 C12orf49Q9H741 205 aa8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 NMNAT1Q9HAN9 279 aaPredicted RBP8.74□□□□□ -1.01
TOPBP1-209ENST00000513818 TIGARQ9NQ88 270 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms