RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 HTR3CQ8WXA8 447 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 TMEM37Q8WXS4 190 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 GTF2H4Q92759 462 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 TAF15Q92804 592 aaKnown RBP eCLIP3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 TOMM40LQ969M1 308 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 ZNF578Q96N58 590 aaPredicted RBP3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 RIT2Q99578 217 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 C7orf50Q9BRJ6 194 aaKnown RBP3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 MED10Q9BTT4 135 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 ANGPTL4Q9BY76 406 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 PARD6BQ9BYG5 372 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 POTEKPQ9BYX7 375 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 FAM124BQ9H5Z6 455 aaPredicted RBP3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 SLC38A10Q9HBR0 1119 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 LPAR2Q9HBW0 351 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 ADAP2Q9NPF8 381 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 LYARQ9NX58 379 aaKnown RBP3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 LHX3Q9UBR4 397 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 SLC7A8Q9UHI5 535 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 PHF11Q9UIL8 331 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 ZNF229Q9UJW7 825 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 IKZF2Q9UKS7 526 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 GSTK1Q9Y2Q3 226 aa3.21□□□□□ -1.9
CALCOCO2-220ENST00000511816 MROH7-TTC4A0A0A0MT08 1334 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 SNED1Q8TER0 1413 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 A0A1B0GU03 582 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 A0A1B0GW15 77 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 ZNF840PA6NDX5 716 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 SMCO2A6NFE2 343 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 MGAT4DA6NG13 374 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 GOLGA8JA6NMD2 632 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 ZNF724A8MTY0 619 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 GOLGA8KD6RF30 607 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 GOLGA6L19H0YKK7 550 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 BTN3A3O00478 584 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 CYB561D2O14569 222 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 EI24O14681 340 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 SH2D1BO14796 132 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 RPP14O95059 124 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 NUDT14O95848 222 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 OCMP0CE72 109 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 CYP11B1P15538 503 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 MMP11P24347 488 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 CDH5P33151 784 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 CBX5P45973 191 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 RFX3P48380 749 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 PGFP49763 221 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 ATP4BP51164 291 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 ACLYP53396 1101 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 CEBPGP53567 150 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 POLR2GP62487 172 aaKnown RBP eCLIP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 PPIAP62937 165 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 HERVK_113P63132 956 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 IL9RQ01113 521 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 KLF5Q13887 457 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 ITIH4Q14624 930 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 MRPL23Q16540 153 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 GGTA1PQ4G0N0 100 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 LINC01620Q4KN68 170 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 DNAL1Q4LDG9 190 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 HIGD2BQ4VC39 106 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 VWA2Q5GFL6 755 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 H3F3CQ6NXT2 135 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 STEAP1BQ6NZ63 245 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 ARMCX5Q6P1M9 558 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 TTC33Q6PID6 262 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 PLEKHG7Q6ZR37 379 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 UTS2BQ765I0 119 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 SLC35D2Q76EJ3 337 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 ARCQ7LC44 396 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 H2BFWTQ7Z2G1 175 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 MRPL21Q7Z2W9 205 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 ITIH5Q86UX2 942 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 RANBP3LQ86VV4 465 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 MMAAQ8IVH4 418 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 SNX31Q8N9S9 440 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 STXBP6Q8NFX7 210 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 OR9G4Q8NGQ1 327 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 WDR36Q8NI36 951 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 PHOSPHO2Q8TCD6 241 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 C10orf35Q96D05 121 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 NAT9Q9BTE0 207 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 ERVK-6Q9BXR3 956 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 OR51V1Q9H2C8 321 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 METTL8Q9H825 291 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 IL1RL2Q9HB29 575 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 SLC25A19Q9HC21 320 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 POLD4Q9HCU8 107 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 MRPL40Q9NQ50 206 aaKnown RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 ABCC13Q9NSE7 274 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 PAQR5Q9NXK6 330 aaPredicted RBP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 ADA2Q9NZK5 511 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 EMCNQ9ULC0 261 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 SPATA2Q9UM82 520 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 POFUT2Q9Y2G5 429 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 SLC6A5Q9Y345 797 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 FBXO7Q9Y3I1 522 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 RNF115Q9Y4L5 304 aa3.2□□□□□ -1.9
CALCOCO2-220ENST00000511816 USP16Q9Y5T5 823 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms