RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 OR9Q2Q8NGE9 314 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 OR13C5Q8NGS8 318 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 LINC01560Q8TB33 94 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 SMPDL3AQ92484 453 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 GGHQ92820 318 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 CFAP36Q96G28 342 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 TNFRSF13CQ96RJ3 184 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 DCTN5Q9BTE1 182 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 LRRC2Q9BYS8 371 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 UCK1Q9HA47 277 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 MAGEF1Q9HAY2 307 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 C3orf14Q9HBI5 128 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 MRM3Q9HC36 420 aaKnown RBP2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 GPATCH2LQ9NWQ4 482 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 HPF1Q9NWY4 346 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 RBAKQ9NYW8 714 aaPredicted RBP2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 PAK5Q9P286 719 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 BAIAP2L1Q9UHR4 511 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 NAP1L2Q9ULW6 460 aaPredicted RBP2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 COL7A1Q02388 2944 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 DNAH1Q9P2D7 4330 aa2.86□□□□□ -1.95
TOPBP1-208ENST00000511439 CMYA5Q8N3K9 4069 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 CHD5Q8TDI0 1954 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 TENM2Q9NT68 2774 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 IGHV4-30-2A0A087WSY4 118 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 IGHV3-38A0A0C4DH36 116 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 KLF18A0A0U1RQI7 1052 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 A0A1B0GTH9 108 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 TMEM129A0AVI4 362 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 E7ENQ6 273 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 F5H5T6 163 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 K7ERQ8 282 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 TRAFD1O14545 582 aaPredicted RBP2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 NDC80O14777 642 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 CASKO14936 926 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 SYT7O43581 403 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 SNAP91O60641 907 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 ANGPTL1O95841 491 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 HBQ1P09105 142 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 SKILP12757 684 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 IL10P22301 178 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 GJB2P29033 226 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 HPDP32754 393 aaPredicted RBP2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 SRP14P37108 136 aaKnown RBP2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 CCNHP51946 323 aaPredicted RBP2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 ACTN3Q08043 901 aaPredicted RBP2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 NPRL3Q12980 569 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 RPA4Q13156 261 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 SCGB2A2Q13296 93 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 GOLGA7BQ2TAP0 167 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 RABGAP1LQ5R372 815 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 RAB12Q6IQ22 244 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 WDR59Q6PJI9 974 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 BANPQ8N9N5 519 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 LPCAT1Q8NF37 534 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 C8orf46Q8TAG6 207 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 ZNF418Q8TF45 676 aaPredicted RBP2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 KRT35Q92764 455 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 C11orf52Q96A22 123 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 ULK4Q96C45 1275 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 OR2M4Q96R27 311 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 ATOH8Q96SQ7 321 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 FAM213AQ9BRX8 229 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 TTYH2Q9BSA4 534 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 ZSCAN16Q9H4T2 348 aaPredicted RBP2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 SAMSN1Q9NSI8 373 aaKnown RBP2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 FAM49BQ9NUQ9 324 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 PSORS1C1Q9UIG5 152 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 HOOK1Q9UJC3 728 aaKnown RBP2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 FBXW2Q9UKT8 454 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 ETV7Q9Y603 341 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 STYXL1Q9Y6J8 313 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 ROS1P08922 2347 aa2.85□□□□□ -1.95
TOPBP1-208ENST00000511439 FREM1Q5H8C1 2179 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 IGHV5-51A0A0C4DH38 117 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 ATP6AP2A0A1C7CYW4 349 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 OR5K4A6NMS3 321 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 KLRC4-KLRK1H3BQV0 150 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 CDC40O60508 579 aaKnown RBP eCLIP2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 HPP00738 406 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 UGT2B4P06133 528 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 IVLP07476 585 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 CPA3P15088 417 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 MAPK3P27361 379 aaPredicted RBP2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 TRIM23P36406 574 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 ACVR1BP36896 505 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 CCT6AP40227 531 aaKnown RBP2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 CCR4P51679 360 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 UCP2P55851 309 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 ABCE1P61221 599 aaKnown RBP2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 IL1RL1Q01638 556 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 LOXL1Q08397 574 aaPredicted RBP2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 CBX3Q13185 183 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 KIAA0141Q14154 515 aaPredicted RBP2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 SPHARQ15513 63 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 TMEM52BQ4KMG9 183 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 CARD16Q5EG05 197 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 ETFRF1Q6IPR1 90 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 ZNF343Q6P1L6 599 aa2.84□□□□□ -1.95
TOPBP1-208ENST00000511439 PAQR6Q6TCH4 344 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms