RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CDH12P55289 794 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 SELENOWP63302 87 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 CSNK2A1P68400 391 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 VLDLRP98155 873 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 LARS2Q15031 903 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 GUSBP1Q15486 140 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 OR1Q1Q15612 314 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 ZNF239Q16600 458 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 GLYATQ6IB77 296 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 ERICH5Q6P6B1 374 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 LINC00114Q6XXX2 140 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 BEND4Q6ZU67 534 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 ASRGL1Q7L266 308 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 ZNF550Q7Z398 422 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 PATL1Q86TB9 770 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 CARM1Q86X55 608 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 TUSC5Q8IXB3 177 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 SLC43A2Q8N370 569 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 CADM2Q8N3J6 435 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 LSMEM1Q8N8F7 131 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 ABHD3Q8WU67 409 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 NINJ1Q92982 152 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 ZHX1-C8orf76Q96EF9 292 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 PIK3IP1Q96FE7 263 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 HSH2DQ96JZ2 352 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 C7orf34Q96L11 122 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 C1orf21Q9H246 121 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 PLSCR4Q9NRQ2 329 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 DCAF13Q9NV06 445 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 KLHL9Q9P2J3 617 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 A4GNTQ9UNA3 340 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 TMED7Q9Y3B3 224 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 V9GYQ6 96 aa7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 ANKRD17O75179 2603 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-213ENST00000509357 AKAP9Q99996 3911 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 FAM221AA4D161 298 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 CPSF4LA6NMK7 179 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 SULT2B1O00204 365 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 SMAD9O15198 467 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 GSC2O15499 205 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 FZD7O75084 574 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 DIRAS1O95057 198 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 RAF1P04049 648 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 HRGP04196 525 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 C8BP07358 591 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 YES1P07947 543 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 PPP3CBP16298 524 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 APOBEC1P41238 236 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 YAP1P46937 504 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 ERFP50548 548 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 RGS8P57771 180 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 RAC3P60763 192 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 COPZ1P61923 177 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 PIN1Q13526 163 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 SYT14P1Q58G82 188 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 ENTPD8Q5MY95 495 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 SAMD4BQ5PRF9 694 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 C16orf89Q6UX73 402 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 CYP2R1Q6VVX0 501 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 GRINAQ7Z429 371 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 MEX3DQ86XN8 651 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 KRT73Q86Y46 540 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 NKAIN4Q8IVV8 208 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 SLC30A8Q8IWU4 369 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 RNF128Q8TEB7 428 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 SLC25A43Q8WUT9 341 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 SLC35B4Q969S0 331 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 ZNF775Q96BV0 537 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 KTI12Q96EK9 354 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 TPD52L3Q96J77 140 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 ZNF607Q96SK3 696 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 MCHR1Q99705 422 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 TACO1Q9BSH4 297 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 THTPAQ9BU02 230 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 ZNF426Q9BUY5 554 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 ARMC7Q9H6L4 198 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 GORASP2Q9H8Y8 452 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 VNN3Q9NY84 501 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 KLHL13Q9P2N7 655 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 RHCGQ9UBD6 479 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 ZNF232Q9UNY5 417 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 SH3GLB1Q9Y371 365 aa7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 HRNRQ86YZ3 2850 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-213ENST00000509357 FTCDNL1E5RQL4 147 aa7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 PIP5K1CO60331 668 aa7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 SERPINB7O75635 380 aa7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 MT-ND1P03886 318 aa7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 IL32P24001 234 aa7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 FKBP2P26885 142 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 HTR3AP46098 478 aa7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 PCYT1AP49585 367 aa7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 DIO1P49895 249 aa7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 POLR2HP52434 150 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 UGT2B15P54855 530 aa7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 OR2B6P58173 313 aa7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 MXRA7P84157 204 aa7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 RASGEF1BQ0VAM2 473 aa7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 INTS11Q5TA45 600 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 WBP2NLQ6ICG8 309 aa7.76□□□□□ -1.17
PDLIM5-213ENST00000509357 LCN8Q6JVE9 175 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms