RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.26□□□□□ -0.29
DDX41-208ENST00000507955 AKR7A2O43488 359 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 RGS9O75916 674 aaPredicted RBP13.26□□□□□ -0.29
DDX41-208ENST00000507955 FOLR1P15328 257 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 HPGDP15428 266 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 PSMB10P40306 273 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 CLDN20P56880 219 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 HSD17B7P56937 341 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 SLC37A1P57057 533 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 RAB25P57735 213 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 FAPQ12884 760 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 ZNF550Q7Z398 422 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 OR4M2Q8NGB6 313 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 OR6K6Q8NGW6 343 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 GHSRQ92847 366 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 GFM1Q96RP9 751 aaKnown RBP13.26□□□□□ -0.29
DDX41-208ENST00000507955 GALNT9Q9HCQ5 603 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 MKKSQ9NPJ1 570 aaPredicted RBP13.26□□□□□ -0.29
DDX41-208ENST00000507955 ASCC3Q8N3C0 2202 aaKnown RBP13.25□□□□□ -0.29
DDX41-208ENST00000507955 A0A1B0GVT2 93 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 FAM240BA0A1B0GVZ2 78 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 NDUFB2O95178 105 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 MT-ND5P03915 603 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 F13BP05160 661 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 SDHBP21912 280 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 AQP2P41181 271 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 SMAD4Q13485 552 aaKnown RBP13.25□□□□□ -0.29
DDX41-208ENST00000507955 SLC25A35Q3KQZ1 300 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 KLHL26Q53HC5 615 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 RPL13AP3Q6NVV1 102 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 OR1L3Q8NH93 324 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 ABHD4Q8TB40 342 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 ZNF285Q96NJ3 590 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 WACQ9BTA9 647 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 GMEB2Q9UKD1 530 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 FBXL21Q9UKT6 434 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 COPS3Q9UNS2 423 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 CELSR3Q9NYQ7 3312 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 LILRA5A6NI73 299 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 FAM25AB3EWG3 89 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 FAM25CB3EWG5 89 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 FAM25GB3EWG6 89 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 LMO7DNF2Z398 122 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 H7C1C5 153 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 KHNYNO15037 678 aaKnown RBP13.25□□□□□ -0.29
DDX41-208ENST00000507955 ZNF749O43361 778 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 SNRPD2P62316 118 aaKnown RBP13.25□□□□□ -0.29
DDX41-208ENST00000507955 LCN6P62502 163 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 GPLD1P80108 840 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 TOMM34Q15785 309 aaPredicted RBP13.25□□□□□ -0.29
DDX41-208ENST00000507955 C14orf28Q4W4Y0 310 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 ZFAND1Q8TCF1 268 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 PGLYRP3Q96LB9 341 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 Q96M85 177 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 JAM3Q9BX67 310 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.25□□□□□ -0.29
DDX41-208ENST00000507955 MCUBQ9NWR8 336 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 FER1L5A0AVI2 2057 aa13.25□□□□□ -0.29
DDX41-208ENST00000507955 ALX3O95076 343 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 EVI2BP34910 448 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 RBM34P42696 430 aaKnown RBP13.24□□□□□ -0.29
DDX41-208ENST00000507955 GZMKP49863 264 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 SKP1P63208 163 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 DMWDQ09019 674 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 RIN1Q13671 783 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 C16orf47Q6ZP98 133 aaPredicted RBP13.24□□□□□ -0.29
DDX41-208ENST00000507955 SIX5Q8N196 739 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 PMM1Q92871 262 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 ELF4Q99607 663 aaPredicted RBP13.24□□□□□ -0.29
DDX41-208ENST00000507955 PDCD1LG2Q9BQ51 273 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 MARVELD1Q9BSK0 173 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 RPRD1BQ9NQG5 326 aaKnown RBP13.24□□□□□ -0.29
DDX41-208ENST00000507955 KLHL21Q9UJP4 597 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 TP53BP1Q12888 1972 aaPredicted RBP13.24□□□□□ -0.29
DDX41-208ENST00000507955 H3BMH7 237 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 ICOSLGO75144 302 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 PRKAR1AP10644 381 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 CSF2RBP32927 897 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 RPS27P42677 84 aaKnown RBP13.24□□□□□ -0.29
DDX41-208ENST00000507955 NXPH1P58417 271 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 HNRNPKP61978 463 aaKnown RBP eCLIP13.24□□□□□ -0.29
DDX41-208ENST00000507955 GRM7Q14831 915 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 C1QL3Q5VWW1 255 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 LAMTOR1Q6IAA8 161 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 ARHGAP11AQ6P4F7 1023 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 METAP1DQ6UB28 335 aaPredicted RBP13.24□□□□□ -0.29
DDX41-208ENST00000507955 C17orf82Q86X59 251 aaPredicted RBP13.24□□□□□ -0.29
DDX41-208ENST00000507955 SLC25A45Q8N413 288 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 ZNF511Q8NB15 262 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 NPEPL1Q8NDH3 523 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 C1orf216Q8TAB5 229 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 POLHQ9Y253 713 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 RASD1Q9Y272 281 aa13.24□□□□□ -0.29
DDX41-208ENST00000507955 IGHV3-20A0A0C4DH32 117 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 TEX13CA0A0J9YWL9 993 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 PRR32B1ATL7 298 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 H3BSH0 61 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 NDUFB5O43674 189 aa13.23□□□□□ -0.29
DDX41-208ENST00000507955 ZNF780AO75290 641 aaPredicted RBP13.23□□□□□ -0.29
DDX41-208ENST00000507955 GAAP10253 952 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms