RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 SH3BP4Q9P0V3 963 aa5.18□□□□□ -1.58
GYPB-204ENST00000504951 CARD8Q9Y2G2 431 aa5.18□□□□□ -1.58
GYPB-204ENST00000504951 STK38LQ9Y2H1 464 aa5.18□□□□□ -1.58
GYPB-204ENST00000504951 FIS1Q9Y3D6 152 aa5.18□□□□□ -1.58
GYPB-204ENST00000504951 HDGFL3Q9Y3E1 203 aa5.18□□□□□ -1.58
GYPB-204ENST00000504951 NUP214P35658 2090 aaPredicted RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 IGHV1-18A0A0C4DH31 117 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 CENPVL1A0A0U1RR11 272 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 CCDC151A5D8V7 595 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 OR6C65A6NJZ3 312 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 H3BNH8 94 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 SULT2B1O00204 365 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 LSM1O15116 133 aaKnown RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 PLIN3O60664 434 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 EIF1BO60739 113 aaKnown RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 BCAS1O75363 584 aaPredicted RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 CRCPO75575 148 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 SLU7O95391 586 aaKnown RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 H6PDO95479 791 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 IGHV3-9P01782 118 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 SHBGP04278 402 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 GSNP06396 782 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 CHRNGP07510 517 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 GUSBP08236 651 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 GSTA1P08263 222 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 ALOX5P09917 674 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 SAGP10523 405 aaPredicted RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 UROSP10746 265 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 LAMP1P11279 417 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 BCKDHAP12694 445 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 NPR2P20594 1047 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 ARRB2P32121 409 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 APOBEC1P41238 236 aaKnown RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 GPR6P46095 362 aaPredicted RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 FOXG1P55316 489 aaPredicted RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 RPL38P63173 70 aaKnown RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 POU6F2P78424 691 aaPredicted RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 SLC25A3Q00325 362 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 NAAAQ02083 359 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 LASP1Q14847 261 aaKnown RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 WHAMMP3Q1A5X7 153 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 UGT3A2Q3SY77 523 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 GALNTL6Q49A17 601 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 ELFN2Q5R3F8 820 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 LIPMQ5VYY2 423 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 ACSM5Q6NUN0 579 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 CDC73Q6P1J9 531 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 FAHD2BQ6P2I3 314 aaPredicted RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 LRIG3Q6UXM1 1119 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 ABHD12BQ7Z5M8 362 aaPredicted RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 CCDC36Q8IYA8 594 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 GSPT2Q8IYD1 628 aaKnown RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 CLEC4FQ8N1N0 589 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 UBE2J2Q8N2K1 259 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 RIBC1Q8N443 379 aaPredicted RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 BPIFB2Q8N4F0 458 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 COX18Q8N8Q8 333 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 OR7A2PQ8NGA2 310 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 ACMSDQ8TDX5 336 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 TMEM234Q8WY98 164 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 RDH5Q92781 318 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 ZHX1-C8orf76Q96EF9 292 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 DNAJA3Q96EY1 480 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 FAHD2AQ96GK7 314 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 ARL5BQ96KC2 179 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 CCT7Q99832 543 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 SLC6A7Q99884 636 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 CITED1Q99966 193 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 KCNS3Q9BQ31 491 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 GATA5Q9BWX5 397 aaPredicted RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 QRSL1Q9H0R6 528 aaKnown RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 PIGUQ9H490 435 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 SERHL2Q9H4I8 314 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 ZNF385DQ9H6B1 395 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 ZCCHC3Q9NUD5 404 aaKnown RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 GPATCH2Q9NW75 528 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 OXSMQ9NWU1 459 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 C1orf109Q9NX04 203 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 PSMC3IPQ9P2W1 217 aaPredicted RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 DCDC2Q9UHG0 476 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 KCNE5Q9UJ90 142 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 SLC9A8Q9Y2E8 581 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 POLR3KQ9Y2Y1 108 aaPredicted RBP5.17□□□□□ -1.58
GYPB-204ENST00000504951 TRAF6Q9Y4K3 522 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 DNAJC15Q9Y5T4 150 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 WNK2Q9Y3S1 2297 aa5.17□□□□□ -1.58
GYPB-204ENST00000504951 LOC105371242A0A075B767 164 aa5.16□□□□□ -1.58
GYPB-204ENST00000504951 A0A1W2PR80 420 aa5.16□□□□□ -1.58
GYPB-204ENST00000504951 hCG_2039718K7EN88 272 aa5.16□□□□□ -1.58
GYPB-204ENST00000504951 M0QZ24 198 aa5.16□□□□□ -1.58
GYPB-204ENST00000504951 SLC28A1O00337 649 aa5.16□□□□□ -1.58
GYPB-204ENST00000504951 TIMM23O14925 209 aa5.16□□□□□ -1.58
GYPB-204ENST00000504951 AZIN1O14977 448 aa5.16□□□□□ -1.58
GYPB-204ENST00000504951 ANKRD28O15084 1053 aa5.16□□□□□ -1.58
GYPB-204ENST00000504951 SYNGR3O43761 229 aa5.16□□□□□ -1.58
GYPB-204ENST00000504951 FCMRO60667 390 aa5.16□□□□□ -1.58
GYPB-204ENST00000504951 GLRA3O75311 464 aa5.16□□□□□ -1.58
GYPB-204ENST00000504951 PRSS23O95084 383 aa5.16□□□□□ -1.58
GYPB-204ENST00000504951 NUDT14O95848 222 aa5.16□□□□□ -1.58
GYPB-204ENST00000504951 C1QCP02747 245 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms