RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 ISL1P61371 349 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 EWSR1Q01844 656 aaKnown RBP eCLIP3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SP4Q02446 784 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 RAD51Q06609 339 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TAF10Q12962 218 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 KLF5Q13887 457 aaPredicted RBP3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TFDP1Q14186 410 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 DMC1Q14565 340 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 FASTKD3Q14CZ7 662 aaKnown RBP3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PSG3Q16557 428 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 DUOXA1Q1HG43 343 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 C18orf21Q32NC0 220 aaPredicted RBP3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SLC35D3Q5M8T2 416 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 AGAP7PQ5VUJ5 663 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PLPP4Q5VZY2 271 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ULK3Q6PHR2 472 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SPSB3Q6PJ21 355 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 Q6ZTC4 211 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SLC26A9Q7LBE3 791 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 LRRC6Q86X45 466 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 MARCH9Q86YJ5 346 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ERI1Q8IV48 349 aaKnown RBP3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 NELFCDQ8IXH7 590 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ZC3H3Q8IXZ2 948 aaKnown RBP3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 CLEC4FQ8N1N0 589 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TEX26Q8N6G2 289 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 KLHDC1Q8N7A1 406 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ZNF781Q8N8C0 355 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 DMBX1Q8NFW5 382 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 CDC26Q8NHZ8 85 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TMEM255BQ8WV15 326 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 CACNG8Q8WXS5 425 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 C8orf44Q96CB5 159 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 AGAP4Q96P64 663 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ERGIC2Q96RQ1 377 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 RBM4BQ9BQ04 359 aaKnown RBP3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TMEM246Q9BRR3 403 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 DCTN5Q9BTE1 182 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 RBM4Q9BWF3 364 aaKnown RBP3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 DUSP16Q9BY84 665 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SHCBP1LQ9BZQ2 653 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 OR2AG1Q9H205 316 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ZNF556Q9HAH1 456 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TMEM165Q9HC07 324 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 S100A14Q9HCY8 104 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 DMAP1Q9NPF5 467 aaPredicted RBP3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 GPR83Q9NYM4 423 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ADA2Q9NZK5 511 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PHF11Q9UIL8 331 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 TBX21Q9UL17 535 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PSMD13Q9UNM6 376 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PRELID1Q9Y255 219 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 KLHDC2Q9Y2U9 406 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SLC6A5Q9Y345 797 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PPIL1Q9Y3C6 166 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PEX16Q9Y5Y5 336 aa3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 MYH9P35579 1960 aaKnown RBP3.7□□□□□ -1.82
PDLIM1P4-201ENST00000504327 KBTBD11-OT1A0A1B0GTJ5 212 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 A0A1W2PQ72 361 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 LRP5LA4QPB2 252 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 H3BMH7 237 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 GOLGA8RI6L899 631 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 LATO43561 262 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PRKRAO75569 313 aaKnown RBP3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 NOL4O94818 638 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 NXPH2O95156 264 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 BAG4O95429 457 aaKnown RBP3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 AHSA1O95433 338 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 FCER2P06734 321 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 H2BFMP0C1H6 154 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 UBCP0CG48 685 aaKnown RBP3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SMIM10L2AP0DMW4 78 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SMIM10L2BP0DMW5 78 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PGCP20142 388 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 GLRA1P23415 457 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 CD82P27701 267 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 DUSP3P51452 185 aaPredicted RBP3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 MLLT10P55197 1068 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 RAB10P61026 200 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 RPS4XP62701 263 aaKnown RBP3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 DR1Q01658 176 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ZP4Q12836 540 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 CNTN1Q12860 1018 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 STX3Q13277 289 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 GPNMBQ14956 572 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ATXN7L3Q14CW9 347 aaPredicted RBP3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 CYTH1Q15438 398 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 BCL2A1Q16548 175 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 VPS26BQ4G0F5 336 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 PTPN20Q4JDL3 420 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 FGD3Q5JSP0 725 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 BEND6Q5SZJ8 279 aaPredicted RBP3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 ZNF470Q6ECI4 717 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 OR52W1Q6IF63 320 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 UQCC3Q6UW78 93 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 UNQ6126/PRO20091Q6UXV3 157 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 MRPL21Q7Z2W9 205 aaKnown RBP3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 CYP4Z1Q86W10 505 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 DCUN1D3Q8IWE4 304 aa3.69□□□□□ -1.82
PDLIM1P4-201ENST00000504327 SELENOHQ8IZQ5 122 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms