RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 TSEN54Q7Z6J9 526 aaKnown RBP8.99□□□□□ -0.97
NUP54-203ENST00000504173 TGIF2LYQ8IUE0 185 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 P3H2Q8IVL5 708 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 ZPLD1Q8TCW7 415 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 STK35Q8TDR2 534 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 ZNF845Q96IR2 970 aaPredicted RBP8.99□□□□□ -0.97
NUP54-203ENST00000504173 TRIB1Q96RU8 372 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 EPYCQ99645 322 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 PIP5K1AQ99755 562 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 TMEM43Q9BTV4 400 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 POTEKPQ9BYX7 375 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 TIGARQ9NQ88 270 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 MCTS1Q9ULC4 181 aaKnown RBP8.99□□□□□ -0.97
NUP54-203ENST00000504173 TESMINQ9Y4I5 508 aa8.99□□□□□ -0.97
NUP54-203ENST00000504173 IGKV1D-42A0A075B6H8 117 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 TRAV36DV7A0A075B6V5 113 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 KIAA1324LA8MWY0 1029 aaPredicted RBP8.98□□□□□ -0.97
NUP54-203ENST00000504173 SULT2B1O00204 365 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 CCL21O00585 134 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 KPNA4O00629 521 aaPredicted RBP8.98□□□□□ -0.97
NUP54-203ENST00000504173 FFAR1O14842 300 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 PRSS23O95084 383 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 PMS2P2O95744 297 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 FOSL1P15407 271 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 HOXB6P17509 224 aaKnown RBP8.98□□□□□ -0.97
NUP54-203ENST00000504173 MAGEA2P43356 314 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 DIO1P49895 249 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 OR2B6P58173 313 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 CSNK2A1P68400 391 aaPredicted RBP8.98□□□□□ -0.97
NUP54-203ENST00000504173 EGR4Q05215 589 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 CCNIQ14094 377 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 KPNB1Q14974 876 aaKnown RBP8.98□□□□□ -0.97
NUP54-203ENST00000504173 PON3Q15166 354 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 IQCCQ4KMZ1 466 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 FGD3Q5JSP0 725 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 RTL6Q6ICC9 239 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 RPTNQ6XPR3 784 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 LINC00114Q6XXX2 140 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 B3GNT6Q6ZMB0 384 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 PIWIL3Q7Z3Z3 882 aaKnown RBP8.98□□□□□ -0.97
NUP54-203ENST00000504173 P4HA3Q7Z4N8 544 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 FJX1Q86VR8 437 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 NKAIN4Q8IVV8 208 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 PIK3C3Q8NEB9 887 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 TMEM255BQ8WV15 326 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 TMEM239Q8WW34 195 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 OSTF1Q92882 214 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 CPNE4Q96A23 557 aaPredicted RBP8.98□□□□□ -0.97
NUP54-203ENST00000504173 ZHX1-C8orf76Q96EF9 292 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 ZNF347Q96SE7 839 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 PRSS27Q9BQR3 290 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 CHID1Q9BWS9 393 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 TAPBPLQ9BX59 468 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 SRXN1Q9BYN0 137 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 PRRG4Q9BZD6 226 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 GSX1Q9H4S2 264 aaPredicted RBP8.98□□□□□ -0.97
NUP54-203ENST00000504173 YY1AP1Q9H869 796 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 NMNAT1Q9HAN9 279 aaPredicted RBP8.98□□□□□ -0.97
NUP54-203ENST00000504173 DLL4Q9NR61 685 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 TRAPPC4Q9Y296 219 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 ZNF175Q9Y473 711 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 FAM215AQ9Y5M1 114 aa8.98□□□□□ -0.97
NUP54-203ENST00000504173 A0A1B0GUH1 482 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 CD8B2A6NJW9 211 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 SLC22A20A6NK97 555 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 KDM4EB2RXH2 506 aaPredicted RBP8.97□□□□□ -0.97
NUP54-203ENST00000504173 E9PLN8 166 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 OR2T1O43869 369 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 NPIPB7O75200 414 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 FKBP6O75344 327 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 IMPDH2P12268 514 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 FCGR2AP12318 317 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 FUT4P22083 530 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 GTF2E2P29084 291 aaKnown RBP8.97□□□□□ -0.97
NUP54-203ENST00000504173 RRM2P31350 389 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 RBM34P42696 430 aaKnown RBP8.97□□□□□ -0.97
NUP54-203ENST00000504173 RPS5P46782 204 aaKnown RBP8.97□□□□□ -0.97
NUP54-203ENST00000504173 UGT2B15P54855 530 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 SMIM11AP58511 58 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 RAC3P60763 192 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 SLC35A1P78382 337 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 OR7A5Q15622 319 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 ZNF239Q16600 458 aaKnown RBP8.97□□□□□ -0.97
NUP54-203ENST00000504173 FAM69AQ5T7M9 428 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 NSUN5P2Q63ZY6 315 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 TMEM211Q6ICI0 200 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 PLXDC2Q6UX71 529 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 ZNF730Q6ZMV8 503 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 PRIMA1Q86XR5 153 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 RPRMLQ8N4K4 120 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 C10orf53Q8N6V4 93 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 OR52J3Q8NH60 311 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 MFSD8Q8NHS3 518 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 FNDC9Q8TBE3 224 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 ITLN2Q8WWU7 325 aaPredicted RBP8.97□□□□□ -0.97
NUP54-203ENST00000504173 ACOT11Q8WXI4 607 aaPredicted RBP8.97□□□□□ -0.97
NUP54-203ENST00000504173 SLC25A36Q96CQ1 311 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 KTI12Q96EK9 354 aaPredicted RBP8.97□□□□□ -0.97
NUP54-203ENST00000504173 HS6ST2Q96MM7 605 aa8.97□□□□□ -0.97
NUP54-203ENST00000504173 VKORC1Q9BQB6 163 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms