RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 OR5P2Q8WZ92 322 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 MOAP1Q96BY2 351 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 FCRL1Q96LA6 429 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 ALKBH3Q96Q83 286 aaPredicted RBP13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 FUT8Q9BYC5 575 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 PIF1Q9H611 641 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 ZNF665Q9H7R5 613 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 ZMAT3Q9HA38 289 aaKnown RBP13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 ZNF180Q9UJW8 692 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 MKLN1Q9UL63 735 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 SLC35A3Q9Y2D2 325 aa13.6□□□□□ -0.23
PDLIM7-210ENST00000503827 PRKDCP78527 4128 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 TMED7-TICAM2A0A0A6YYA0 188 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 CENPVL1A0A0U1RR11 272 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 ZNF208O43345 1280 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 PLPP2O43688 288 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 FCMRO60667 390 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 AK1P00568 194 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 GSNP06396 782 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 SNRPAP09012 282 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 UROSP10746 265 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 MRPS11P82912 194 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 ZP4Q12836 540 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 KRT80Q6KB66 452 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 GPAT4Q86UL3 456 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 MYPOPQ86VE0 399 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 PSMA8Q8TAA3 256 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 RNF217Q8TC41 542 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 YIPF5Q969M3 257 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 RAB39BQ96DA2 213 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 MRPL37Q9BZE1 423 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 CRLF2Q9HC73 371 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 OXSMQ9NWU1 459 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 TMED7Q9Y3B3 224 aa13.59□□□□□ -0.23
PDLIM7-210ENST00000503827 DUXAA6NLW8 204 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 NUDT17P0C025 328 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 ARR3P36575 388 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 HPCAL1P37235 193 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 RPL3P39023 403 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 SH3BGRP55822 239 aaPredicted RBP13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 NAA20P61599 178 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 RPL38P63173 70 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 NPRL3Q12980 569 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 LSM12Q3MHD2 195 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 RFTN2Q52LD8 501 aaPredicted RBP13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 TMEM225Q6GV28 225 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 EMBQ6PCB8 327 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 TMEM99Q8N816 258 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 FAM71CQ8NEG0 241 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 SFXN5Q8TD22 340 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 CCDC126Q96EE4 140 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 C1QTNF5Q9BXJ0 243 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 NELFAQ9H3P2 528 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 SERHL2Q9H4I8 314 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 NOX3Q9HBY0 568 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 ATP6V1HQ9UI12 483 aa13.58□□□□□ -0.24
PDLIM7-210ENST00000503827 TMEM72A0PK05 275 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 AKR7A3O95154 331 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 GPIP06744 558 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 NR4A1P22736 598 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 GATA3P23771 443 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 IDH2P48735 452 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 SELENOPP49908 381 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 POLR2HP52434 150 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 ARHGAP11BQ3KRB8 267 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 LINGO2Q7L985 606 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 ARFGAP2Q8N6H7 521 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 SIGLECL1Q8N7X8 197 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 OR7A2PQ8NGA2 310 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 OR5AK3PQ8NH89 298 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 OIT3Q8WWZ8 545 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 LRRC58Q96CX6 371 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 DUX5Q96PT3 197 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 C7orf69Q9H7B7 122 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 TMED5Q9Y3A6 229 aa13.57□□□□□ -0.24
PDLIM7-210ENST00000503827 NOTCH1P46531 2555 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 DNAJC9-AS1A6NH13 148 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 AQP7P3A6NL99 342 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 SCAMP2O15127 329 aaKnown RBP13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 BCAS1O75363 584 aaPredicted RBP13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 ALX3O95076 343 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 C6orf47O95873 294 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 LAMP1P11279 417 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 NEFHP12036 1026 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 MATN1P21941 496 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 ALDH3B1P43353 468 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 MAP2K6P52564 334 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 SEC24CP53992 1094 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 ROR2Q01974 943 aaKnown RBP13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 CEACAM7Q14002 265 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 MAPK14Q16539 360 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 FAM153CQ494X1 144 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 ATP6AP1LQ52LC2 224 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 NIPAL3Q6P499 406 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 FRMD7Q6ZUT3 714 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 DOK3Q7L591 496 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 OLIG3Q7RTU3 272 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 C16orf62Q7Z3J2 963 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 TREML1Q86YW5 311 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 GSPT2Q8IYD1 628 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms