RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 SPOCK1Q08629 439 aa17.09■□□□□ 0.33
UBE2D3-215ENST00000503418 TNK1Q13470 666 aa17.09■□□□□ 0.33
UBE2D3-215ENST00000503418 SLC22A25Q6T423 547 aa17.09■□□□□ 0.33
UBE2D3-215ENST00000503418 AAED1Q7RTV5 226 aa17.09■□□□□ 0.33
UBE2D3-215ENST00000503418 OR9K2Q8NGE7 335 aa17.09■□□□□ 0.33
UBE2D3-215ENST00000503418 BBS10Q8TAM1 723 aa17.09■□□□□ 0.33
UBE2D3-215ENST00000503418 C3orf49Q96BT1 292 aa17.09■□□□□ 0.33
UBE2D3-215ENST00000503418 SPDL1Q96EA4 605 aa17.09■□□□□ 0.33
UBE2D3-215ENST00000503418 ATP6V1G3Q96LB4 118 aa17.09■□□□□ 0.33
UBE2D3-215ENST00000503418 MUS81Q96NY9 551 aa17.09■□□□□ 0.33
UBE2D3-215ENST00000503418 ZNF385AQ96PM9 386 aaKnown RBP17.09■□□□□ 0.33
UBE2D3-215ENST00000503418 C1QTNF6Q9BXI9 259 aa17.09■□□□□ 0.33
UBE2D3-215ENST00000503418 PRDM4Q9UKN5 801 aa17.09■□□□□ 0.33
UBE2D3-215ENST00000503418 NSD1Q96L73 2696 aaPredicted RBP17.08■□□□□ 0.33
UBE2D3-215ENST00000503418 HEATR1Q9H583 2144 aaKnown RBP17.08■□□□□ 0.33
UBE2D3-215ENST00000503418 PDLIM1O00151 329 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 HOXB9P17482 250 aaPredicted RBP17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 PTNP21246 168 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 PTAFRP25105 342 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 MRPL19P49406 292 aaKnown RBP17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 TTMPQ5BVD1 217 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 C1orf140Q5VVS0 124 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 PRAMEF8Q5VWM4 474 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 PRAMEF7Q5VXH5 474 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 TMEM225Q6GV28 225 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 FUNDC1Q8IVP5 155 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 NFKBIDQ8NI38 313 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 TMEM45BQ96B21 275 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 RADILQ96JH8 1075 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 TRAF4Q9BUZ4 470 aaPredicted RBP17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 SF3B5Q9BWJ5 86 aaKnown RBP17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 BCL2L10Q9HD36 194 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 SLC25A37Q9NYZ2 338 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 DCTN4Q9UJW0 460 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 MGAT4BQ9UQ53 548 aa17.08■□□□□ 0.32
UBE2D3-215ENST00000503418 CD8AP01732 235 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 BMP2P12643 396 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 CDH2P19022 906 aaPredicted RBP17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 CD40P25942 277 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 PCSK6P29122 969 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 AQP5P55064 265 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 TGFBR3Q03167 851 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 ETFDHQ16134 617 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 GCNT6Q5T4J0 391 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 BLOC1S3Q6QNY0 202 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 MSRB3Q8IXL7 192 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 ZIC4Q8N9L1 334 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 CCDC28BQ9BUN5 200 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 SLCO5A1Q9H2Y9 848 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 SLAMF8Q9P0V8 285 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 RPS6KB2Q9UBS0 482 aa17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 FN1P02751 2386 aaKnown RBP17.07■□□□□ 0.32
UBE2D3-215ENST00000503418 TMEM229AB2RXF0 380 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 KRT33AO76009 404 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 AHSA1O95433 338 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 IGHV4-39P01824 125 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 ARAFP10398 606 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 MPGP29372 298 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 ACVR1BP36896 505 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 AGKQ53H12 422 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 PAGE3Q5JUK9 113 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 LRIF1Q5T3J3 769 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 AGAP6Q5VW22 663 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 DTX2Q86UW9 622 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 DEPDC4Q8N2C3 294 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 C17orf78Q8N4C9 275 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 WDR31Q8NA23 367 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 POMGNT2Q8NAT1 580 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 MAPK1IP1LQ8NDC0 245 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 C1orf162Q8NEQ5 155 aaPredicted RBP17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 STK35Q8TDR2 534 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 SLC25A36Q96CQ1 311 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 HS6ST2Q96MM7 605 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 AMBRA1Q9C0C7 1298 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 SLC17A5Q9NRA2 495 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 VAPAQ9P0L0 249 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 GDF2Q9UK05 429 aaPredicted RBP17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 AMDHD2Q9Y303 409 aa17.06■□□□□ 0.32
UBE2D3-215ENST00000503418 TLN2Q9Y4G6 2542 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 ELOA3DA6NLF2 546 aaPredicted RBP17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 E7EQL1 145 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 RNF223E7ERA6 249 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 NDUFS7O75251 213 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 ETS2P15036 469 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 PPIBP23284 216 aaKnown RBP17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 GTF2E2P29084 291 aaKnown RBP17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 P2RY4P51582 365 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 PPP2R2BQ00005 443 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 SLC25A3Q00325 362 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 ELOA3BQ3SY89 546 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 KLHL24Q6TFL4 600 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 C10orf111Q8N326 155 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 ELOA3Q8NG57 546 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 CSPG4Q6UVK1 2322 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 PLCE1Q9P212 2302 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 ZANQ9Y493 2812 aa17.05■□□□□ 0.32
UBE2D3-215ENST00000503418 INAFM1C9JVW0 142 aa17.04■□□□□ 0.32
UBE2D3-215ENST00000503418 NPIPB7O75200 414 aa17.04■□□□□ 0.32
UBE2D3-215ENST00000503418 VAMP5O95183 116 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms