RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 TMPPEQ6ZT21 453 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 P4HA3Q7Z4N8 544 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 NANOGNBQ7Z5D8 188 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 TMEM179BQ7Z7N9 219 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 CDK20Q8IZL9 346 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 HS3ST5Q8IZT8 346 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 AQP11Q8NBQ7 271 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 MIB2Q96AX9 1013 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 BPIFA2Q96DR5 249 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 FUZQ9BT04 418 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 ASPNQ9BXN1 380 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 POTEKPQ9BYX7 375 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 TIGARQ9NQ88 270 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 PDP1Q9P0J1 537 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-227ENST00000498056 TINAGQ9UJW2 476 aa12.17□□□□□ -0.46
CPNE1-227ENST00000498056 MCTS1Q9ULC4 181 aaKnown RBP12.17□□□□□ -0.46
CPNE1-227ENST00000498056 TRGV8A0A0C4DH27 118 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 LIPT2A6NK58 231 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 SLC22A20A6NK97 555 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 EFCAB9A8MZ26 197 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 M0R082 166 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 OR2T1O43869 369 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 WDR1O75083 606 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 OR7A10O76100 309 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 AKR7A3O95154 331 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 FUT1P19526 365 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 KLK2P20151 261 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 GRPRP30550 384 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 IFNGR2P38484 337 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 CASP6P55212 293 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 CARD18P57730 90 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 SLC35A1P78382 337 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 GK3PQ14409 553 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 MICAQ29983 383 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 GXYLT1Q4G148 440 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 OTUD3Q5T2D3 398 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-227ENST00000498056 C1orf185Q5T7R7 199 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 PGBD2Q6P3X8 592 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 SHQ1Q6PI26 577 aaKnown RBP12.16□□□□□ -0.46
CPNE1-227ENST00000498056 SLC46A3Q7Z3Q1 461 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 RNF113BQ8IZP6 322 aaKnown RBP12.16□□□□□ -0.46
CPNE1-227ENST00000498056 OR13C2Q8NGS9 318 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 OR5K1Q8NHB7 308 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 MFSD8Q8NHS3 518 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 ZNF417Q8TAU3 575 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 GIPC3Q8TF64 312 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 OSTF1Q92882 214 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 CENPNQ96H22 339 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-227ENST00000498056 ZNF587Q96SQ5 575 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-227ENST00000498056 PRRG4Q9BZD6 226 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 TP63Q9H3D4 680 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-227ENST00000498056 NANSQ9NR45 359 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 PAQR5Q9NXK6 330 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-227ENST00000498056 SEC14L4Q9UDX3 406 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 OAZ3Q9UMX2 235 aa12.16□□□□□ -0.46
CPNE1-227ENST00000498056 TRAV27A0A087WT01 109 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 FTCDNL1E5RQL4 147 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 SMAD9O15198 467 aaKnown RBP12.15□□□□□ -0.46
CPNE1-227ENST00000498056 MT-ATP6P00846 226 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 FCGR2AP12318 317 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 POU2F1P14859 743 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 GABRA1P14867 456 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 ANPEPP15144 967 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 MAKP20794 623 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 ENPP1P22413 925 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 OMPP47874 163 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 CTBP2P56545 445 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 PRKCDQ05655 676 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 EMC4Q5J8M3 183 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 RPTNQ6XPR3 784 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 MAMDC2Q7Z304 686 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-227ENST00000498056 ATCAYQ86WG3 371 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 HIPK1Q86Z02 1210 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 ZDHHC13Q8IUH4 622 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 EPHX4Q8IUS5 362 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 SVOPLQ8N434 492 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 LINC00471Q8N535 108 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 LRRC17Q8N6Y2 441 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 ATG16L2Q8NAA4 619 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 FNDC9Q8TBE3 224 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 FANK1Q8TC84 345 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 ROBO4Q8WZ75 1007 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 GTPBP3Q969Y2 492 aaKnown RBP12.15□□□□□ -0.46
CPNE1-227ENST00000498056 UCN2Q96RP3 112 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 FKRPQ9H9S5 495 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 NTN4Q9HB63 628 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 CHST11Q9NPF2 352 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 CLCF1Q9UBD9 225 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 ZNF229Q9UJW7 825 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 OSGIN2Q9Y236 505 aa12.15□□□□□ -0.46
CPNE1-227ENST00000498056 MAGED1Q9Y5V3 778 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-227ENST00000498056 SMG1Q96Q15 3661 aaKnown RBP12.15□□□□□ -0.46
CPNE1-227ENST00000498056 MYO7BQ6PIF6 2116 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 ARRDC5A6NEK1 342 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 KDM4EB2RXH2 506 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-227ENST00000498056 G3V2T6 193 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 DNPH1O43598 174 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 SERPINI2O75830 405 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 HIST1H2ABP04908 130 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 ACVR2AP27037 513 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms