RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 EMC3Q9P0I2 261 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.62□□□□□ -0.23
NUP50-219ENST00000497960 EGFL7Q9UHF1 273 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 PRPF19Q9UMS4 504 aaKnown RBP13.62□□□□□ -0.23
NUP50-219ENST00000497960 A0A1W2PPR1 153 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 M0QX08 132 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 SIAH2O43255 324 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 ATP5HO75947 161 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 PDE5AO76074 875 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 MFN2O95140 757 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 ATE1O95260 518 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 IFNA14P01570 189 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 GKN3PP0CG01 181 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 HSD17B1P14061 328 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 NCK1P16333 377 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 GGT1P19440 569 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 KLK2P20151 261 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 IL32P24001 234 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 OR2B6P58173 313 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 NCALDP61601 193 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 DMTNQ08495 405 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 P2RY6Q15077 328 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 PDK3Q15120 406 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 SPATS1Q496A3 300 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 BEX5Q5H9J7 111 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 ZNF100Q8IYN0 542 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 GABRG1Q8N1C3 465 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 ARHGAP24Q8N264 748 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 CADM2Q8N3J6 435 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 PIGXQ8TBF5 258 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 RASSF5Q8WWW0 418 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 ZNF775Q96BV0 537 aaPredicted RBP13.61□□□□□ -0.23
NUP50-219ENST00000497960 TAMM41Q96BW9 452 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 ALPK1Q96QP1 1244 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 ZNF300Q96RE9 604 aaPredicted RBP13.61□□□□□ -0.23
NUP50-219ENST00000497960 CXXC4Q9H2H0 198 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 MAGEL2Q9UJ55 1249 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 ING1Q9UK53 422 aaPredicted RBP13.61□□□□□ -0.23
NUP50-219ENST00000497960 TRAPPC4Q9Y296 219 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 PRR14LQ5THK1 2151 aa13.61□□□□□ -0.23
NUP50-219ENST00000497960 TMEM72A0PK05 275 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 GPR171O14626 319 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 GCM2O75603 506 aaPredicted RBP13.6□□□□□ -0.23
NUP50-219ENST00000497960 ADAP00813 363 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 THBDP07204 575 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 CXCR1P25024 350 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 OR3A2P47893 321 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 SLC35A1P78382 337 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 BNIP2Q12982 314 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 CEACAM7Q14002 265 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 SFRP5Q5T4F7 317 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 ABLIM2Q6H8Q1 611 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 WBP2NLQ6ICG8 309 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 C22orf34Q6ZV56 151 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 WFDC8Q8IUA0 241 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 CLIP4Q8N3C7 705 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 KISS1RQ969F8 398 aaPredicted RBP13.6□□□□□ -0.23
NUP50-219ENST00000497960 SLC7A6OSQ96CW6 309 aaPredicted RBP13.6□□□□□ -0.23
NUP50-219ENST00000497960 DNAJA3Q96EY1 480 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 USB1Q9BQ65 265 aaKnown RBP13.6□□□□□ -0.23
NUP50-219ENST00000497960 BTBD10Q9BSF8 475 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 THTPAQ9BU02 230 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 ADAM19Q9H013 955 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 CD300AQ9UGN4 299 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 HIVEP1P15822 2718 aa13.6□□□□□ -0.23
NUP50-219ENST00000497960 ARID1AO14497 2285 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 IGKV3D-15A0A087WSY6 115 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 FRS3O43559 492 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 EIF1BO60739 113 aaKnown RBP13.59□□□□□ -0.23
NUP50-219ENST00000497960 ZNF682O95780 498 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 CD247P20963 164 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 KDELR2P33947 212 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 ACAA2P42765 397 aaKnown RBP13.59□□□□□ -0.23
NUP50-219ENST00000497960 NR1H2P55055 460 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 RGS8P57771 180 aaPredicted RBP13.59□□□□□ -0.23
NUP50-219ENST00000497960 GABPB1Q06547 395 aaPredicted RBP13.59□□□□□ -0.23
NUP50-219ENST00000497960 ITGADQ13349 1161 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 DEFB113Q30KQ7 82 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 GLIPR1L2Q4G1C9 344 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 CYBRD1Q53TN4 286 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 ALKBH2Q6NS38 261 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 Q6ZT83 130 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 PROX1Q92786 737 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 MCUR1Q96AQ8 359 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 S100PBPQ96BU1 408 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 CCDC124Q96CT7 223 aaKnown RBP13.59□□□□□ -0.23
NUP50-219ENST00000497960 NAA11Q9BSU3 229 aaPredicted RBP13.59□□□□□ -0.23
NUP50-219ENST00000497960 POTEKPQ9BYX7 375 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 ADPRHL2Q9NX46 363 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 NOSIPQ9Y314 301 aaKnown RBP13.59□□□□□ -0.23
NUP50-219ENST00000497960 CHST2Q9Y4C5 530 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 SNX13Q9Y5W8 968 aa13.59□□□□□ -0.23
NUP50-219ENST00000497960 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.58□□□□□ -0.24
NUP50-219ENST00000497960 ZNF814B7Z6K7 855 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 M0R3H8 397 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 ARPC2O15144 300 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 KLF4O43474 513 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 TPST1O60507 370 aa13.58□□□□□ -0.24
NUP50-219ENST00000497960 DNAJC8O75937 253 aaPredicted RBP13.58□□□□□ -0.24
NUP50-219ENST00000497960 CNOT4O95628 575 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms