RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 TRIM2Q9C040 744 aa4.84□□□□□ -1.63
UBE3C-208ENST00000497368 AMBRA1Q9C0C7 1298 aa4.84□□□□□ -1.63
UBE3C-208ENST00000497368 OR11A1Q9GZK7 315 aa4.84□□□□□ -1.63
UBE3C-208ENST00000497368 NELFAQ9H3P2 528 aa4.84□□□□□ -1.63
UBE3C-208ENST00000497368 C3orf14Q9HBI5 128 aa4.84□□□□□ -1.63
UBE3C-208ENST00000497368 CTPS2Q9NRF8 586 aa4.84□□□□□ -1.63
UBE3C-208ENST00000497368 PNPOQ9NVS9 261 aa4.84□□□□□ -1.63
UBE3C-208ENST00000497368 NDRG3Q9UGV2 375 aa4.84□□□□□ -1.63
UBE3C-208ENST00000497368 MID2Q9UJV3 735 aa4.84□□□□□ -1.63
UBE3C-208ENST00000497368 CDC42EP3Q9UKI2 254 aa4.84□□□□□ -1.63
UBE3C-208ENST00000497368 MKLN1Q9UL63 735 aa4.84□□□□□ -1.63
UBE3C-208ENST00000497368 EIF3LQ9Y262 564 aaKnown RBP4.84□□□□□ -1.63
UBE3C-208ENST00000497368 DTNAQ9Y4J8 743 aa4.84□□□□□ -1.63
UBE3C-208ENST00000497368 SNX8Q9Y5X2 465 aa4.84□□□□□ -1.63
UBE3C-208ENST00000497368 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.84□□□□□ -1.642e-6■■□□□ 13.6
UBE3C-208ENST00000497368 RTTNQ86VV8 2226 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 TMEM72A0PK05 275 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 WDR91A4D1P6 747 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 HMGN4O00479 90 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 RNASET2O00584 256 aaKnown RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ZNF264O43296 627 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 EIF4E2O60573 245 aaKnown RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 FZD7O75084 574 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 SNNO75324 88 aaPredicted RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 PGM3O95394 542 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ADAP00813 363 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 IGHV3-9P01782 118 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 SERPINE1P05121 402 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 GUSBP08236 651 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 IGFBP1P08833 259 aaPredicted RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 UBTFL6P0CB48 400 aaPredicted RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 OR12D1P0DN82 309 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ZNF20P17024 532 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 PTNP21246 168 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 PCSK6P29122 969 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ADSLP30566 484 aaPredicted RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 SERPINB5P36952 375 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 DIO1P49895 249 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 MECP2P51608 486 aaKnown RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 SLC16A1P53985 500 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ABCE1P61221 599 aaKnown RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 UFM1P61960 85 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 IRX1P78414 480 aaPredicted RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 H3F3AP84243 136 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 CD83Q01151 205 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 LGALS3BPQ08380 585 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 BST1Q10588 318 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 CHI3L2Q15782 390 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 SYPL1Q16563 259 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 SGCBQ16585 318 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 TMEM176BQ3YBM2 270 aaPredicted RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ZNF672Q499Z4 452 aaPredicted RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 TIGD2Q4W5G0 525 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 SYT14P1Q58G82 188 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 PPP4R4Q6NUP7 873 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 C3orf33Q6P1S2 294 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 R3HCC1LQ7Z5L2 792 aaKnown RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 MYPOPQ86VE0 399 aaPredicted RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 CNPY4Q8N129 248 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ZNF433Q8N7K0 673 aaPredicted RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 WDR31Q8NA23 367 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ATP6V1C2Q8NEY4 427 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 TOR1AIP2Q8NFQ8 470 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ADAMTS15Q8TE58 950 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 PIGTQ969N2 578 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 CPNE4Q96A23 557 aaPredicted RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 VPS33AQ96AX1 596 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 TESCQ96BS2 214 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ROPN1LQ96C74 230 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 TUBGCP3Q96CW5 907 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 NEURL3Q96EH8 262 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 CCDC115Q96NT0 180 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ZIM3Q96PE6 472 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 THUMPD3Q9BV44 507 aaKnown RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 POTEKPQ9BYX7 375 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 NUF2Q9BZD4 464 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 LAT2Q9GZY6 243 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 SEC61A2Q9H9S3 476 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 MEAF6Q9HAF1 191 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ACER3Q9NUN7 267 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 AIG1Q9NVV5 245 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ZNF226Q9NYT6 803 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 MALT1Q9UDY8 824 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 MRTO4Q9UKD2 239 aaKnown RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 RAB21Q9UL25 225 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 MCTS1Q9ULC4 181 aaKnown RBP4.83□□□□□ -1.64
UBE3C-208ENST00000497368 GPR52Q9Y2T5 361 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 RNF115Q9Y4L5 304 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 SLC25A15Q9Y619 301 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 TENM1Q9UKZ4 2725 aa4.83□□□□□ -1.64
UBE3C-208ENST00000497368 ALPK2Q86TB3 2170 aa4.82□□□□□ -1.64
UBE3C-208ENST00000497368 HEATR1Q9H583 2144 aaKnown RBP4.82□□□□□ -1.64
UBE3C-208ENST00000497368 IGHV4-30-2A0A087WSY4 118 aa4.82□□□□□ -1.64
UBE3C-208ENST00000497368 A0A1W2PR80 420 aa4.82□□□□□ -1.64
UBE3C-208ENST00000497368 ZNF724A8MTY0 619 aa4.82□□□□□ -1.64
UBE3C-208ENST00000497368 TMEM114B3SHH9 223 aa4.82□□□□□ -1.64
UBE3C-208ENST00000497368 E7EQL1 145 aa4.82□□□□□ -1.64
UBE3C-208ENST00000497368 SYNGR4O95473 234 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms