RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 UPB1Q9UBR1 384 aa13.81□□□□□ -0.2
MACF1-223ENST00000496360 MBD1Q9UIS9 605 aaPredicted RBP13.81□□□□□ -0.2
MACF1-223ENST00000496360 ADAM29Q9UKF5 820 aa13.81□□□□□ -0.2
MACF1-223ENST00000496360 IFITM5A6NNB3 132 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 COCHO43405 550 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 SLC2A10O95528 541 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 CHRM4P08173 479 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 DDX6P26196 483 aaKnown RBP eCLIP13.8□□□□□ -0.2
MACF1-223ENST00000496360 KCNJ3P48549 501 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 SNRPD1P62314 119 aaKnown RBP13.8□□□□□ -0.2
MACF1-223ENST00000496360 SORDQ00796 357 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 SSBP1Q04837 148 aaKnown RBP13.8□□□□□ -0.2
MACF1-223ENST00000496360 GLT8D1Q68CQ7 371 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 JMJD6Q6NYC1 403 aaPredicted RBP13.8□□□□□ -0.2
MACF1-223ENST00000496360 RPL22L1Q6P5R6 122 aaKnown RBP13.8□□□□□ -0.2
MACF1-223ENST00000496360 IZUMO1Q8IYV9 350 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 C1orf216Q8TAB5 229 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 SGK3Q96BR1 496 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 SAMD8Q96LT4 415 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 CMSS1Q9BQ75 279 aaKnown RBP13.8□□□□□ -0.2
MACF1-223ENST00000496360 LRFN3Q9BTN0 628 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 MYOZ1Q9NP98 299 aaPredicted RBP13.8□□□□□ -0.2
MACF1-223ENST00000496360 KLK11Q9UBX7 282 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 MKL2Q9ULH7 1088 aa13.8□□□□□ -0.2
MACF1-223ENST00000496360 A0A0B4J203 849 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 OR6C68A6NDL8 312 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 UNC119BA6NIH7 251 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 H7BY64 318 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 K7ERQ8 282 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 SCAMP1O15126 338 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 FGF16O43320 207 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 PMS2P2O95744 297 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 C8AP07357 584 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 HNRNPA1P09651 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
MACF1-223ENST00000496360 ACADLP28330 430 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 AHRP35869 848 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 ACVR1BP36896 505 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 PPP2CBP62714 309 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 PPP2CAP67775 309 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 ZNF85Q03923 595 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 CBFBQ13951 182 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 IRF4Q15306 451 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 IER5LQ5T953 404 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 PIP5KL1Q5T9C9 394 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 SLC8B1Q6J4K2 584 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 MTFR2Q6P444 385 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 TMEM88Q6PEY1 159 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 C11orf88Q6PI97 169 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 ZNF813Q6ZN06 617 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 SLC43A2Q8N370 569 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 ARL11Q969Q4 196 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 TBX5Q99593 518 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 TEAD3Q99594 435 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 RHBGQ9H310 441 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 C1orf198Q9H425 327 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 IL20RAQ9UHF4 553 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 PCDHB10Q9UN67 800 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 ZNF840PA6NDX5 716 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 RCBTB2O95199 551 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 C1orf105O95561 183 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 PYCR1P32322 319 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 BLOC1S1P78537 153 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 CCSMST1Q4G0I0 132 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 NKAPLQ5M9Q1 402 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 KHDRBS2Q5VWX1 349 aaKnown RBP13.79□□□□□ -0.2
MACF1-223ENST00000496360 USP53Q70EK8 1073 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 CBLN2Q8IUK8 224 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 GLB1L2Q8IW92 636 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 NRMQ8IXM6 262 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 SAMD14Q8IZD0 417 aaPredicted RBP13.79□□□□□ -0.2
MACF1-223ENST00000496360 NINQ8N4C6 2090 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 MIB2Q96AX9 1013 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 WDR89Q96FK6 387 aaPredicted RBP13.79□□□□□ -0.2
MACF1-223ENST00000496360 CNTNAP3BQ96NU0 1288 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 KLF16Q9BXK1 252 aaPredicted RBP13.79□□□□□ -0.2
MACF1-223ENST00000496360 CPEB1Q9BZB8 566 aaKnown RBP13.79□□□□□ -0.2
MACF1-223ENST00000496360 EGLN1Q9GZT9 426 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 SUV39H2Q9H5I1 410 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 TNFSF18Q9UNG2 199 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 PLEKHA6Q9Y2H5 1048 aa13.79□□□□□ -0.2
MACF1-223ENST00000496360 C5orf52A6NGY3 159 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 CPSF4LA6NMK7 179 aaKnown RBP13.78□□□□□ -0.2
MACF1-223ENST00000496360 H7C417 338 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 BHLHE40O14503 412 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 RBBP9O75884 186 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 FBP1P09467 338 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 PRF1P14222 555 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 ABOP16442 354 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 BMP7P18075 431 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 PDHA2P29803 388 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 PTGFRP43088 359 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 GPR4P46093 362 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 PRLHRP49683 370 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 ZXDAP98168 799 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 PDZK1IP1Q13113 114 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 CSRP2Q16527 193 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 TEX30Q5JUR7 227 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 C18orf63Q68DL7 685 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 IL34Q6ZMJ4 242 aa13.78□□□□□ -0.2
MACF1-223ENST00000496360 RTL10Q7L3V2 364 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms