RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ZNF385AQ96PM9 386 aaKnown RBP19.31■□□□□ 0.68
HDDC3-203ENST00000494993 PIF1Q9H611 641 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 PMF1-BGLAPU3KQ54 211 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 CDHR4A6H8M9 788 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 AQP7P3A6NL99 342 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 CXCR1P25024 350 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 BST1Q10588 318 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 MAPK11Q15759 364 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 NANOS1Q8WY41 292 aaKnown RBP19.3■□□□□ 0.68
HDDC3-203ENST00000494993 TMEM158Q8WZ71 300 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 PROX1Q92786 737 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 BOD1Q96IK1 185 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 KCNK17Q96T54 332 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 RLIMQ9NVW2 624 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 TMEM160Q9NX00 188 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 PRDM4Q9UKN5 801 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 MOKQ9UQ07 419 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 GPR45Q9Y5Y3 372 aa19.3■□□□□ 0.68
HDDC3-203ENST00000494993 DSPPQ9NZW4 1301 aa19.29■□□□□ 0.68
HDDC3-203ENST00000494993 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.29■□□□□ 0.68
HDDC3-203ENST00000494993 KRT75O95678 551 aa19.29■□□□□ 0.68
HDDC3-203ENST00000494993 GKN3PP0CG01 181 aa19.29■□□□□ 0.68
HDDC3-203ENST00000494993 CDH2P19022 906 aaPredicted RBP19.29■□□□□ 0.68
HDDC3-203ENST00000494993 LIN52Q52LA3 116 aa19.29■□□□□ 0.68
HDDC3-203ENST00000494993 HIKESHIQ53FT3 197 aa19.29■□□□□ 0.68
HDDC3-203ENST00000494993 ZNF836Q6ZNA1 936 aa19.29■□□□□ 0.68
HDDC3-203ENST00000494993 ABHD12BQ7Z5M8 362 aaPredicted RBP19.29■□□□□ 0.68
HDDC3-203ENST00000494993 GPAT4Q86UL3 456 aa19.29■□□□□ 0.68
HDDC3-203ENST00000494993 VRK2Q86Y07 508 aa19.29■□□□□ 0.68
HDDC3-203ENST00000494993 ZBTB18Q99592 522 aa19.29■□□□□ 0.68
HDDC3-203ENST00000494993 KCNK9Q9NPC2 374 aa19.29■□□□□ 0.68
HDDC3-203ENST00000494993 P2RX2Q9UBL9 471 aa19.29■□□□□ 0.68
HDDC3-203ENST00000494993 RFXANKO14593 260 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 LY6HO94772 140 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 F12P00748 615 aaPredicted RBP19.28■□□□□ 0.68
HDDC3-203ENST00000494993 IGHV4-31P0DP07 118 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 ACAA2P42765 397 aaKnown RBP19.28■□□□□ 0.68
HDDC3-203ENST00000494993 MVDP53602 400 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 BNIP2Q12982 314 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 SWI5Q1ZZU3 235 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 TNFAIP8L3Q5GJ75 292 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 CYB5R2Q6BCY4 276 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 WBP2NLQ6ICG8 309 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 CADM2Q8N3J6 435 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 GLB1L3Q8NCI6 653 aaPredicted RBP19.28■□□□□ 0.68
HDDC3-203ENST00000494993 OR52P1PQ8NH57 321 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 FBXO17Q96EF6 278 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 AURKBQ96GD4 344 aaPredicted RBP19.28■□□□□ 0.68
HDDC3-203ENST00000494993 TAPBPLQ9BX59 468 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 CENPHQ9H3R5 247 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 OBP2BQ9NPH6 170 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 SLC6A13Q9NSD5 602 aa19.28■□□□□ 0.68
HDDC3-203ENST00000494993 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.28■□□□□ 0.68
HDDC3-203ENST00000494993 V9GYY5 206 aaPredicted RBP19.28■□□□□ 0.68
HDDC3-203ENST00000494993 A8MVM7 634 aa19.27■□□□□ 0.68
HDDC3-203ENST00000494993 KLF11O14901 512 aa19.27■□□□□ 0.68
HDDC3-203ENST00000494993 ZNF16P17020 682 aaPredicted RBP19.27■□□□□ 0.68
HDDC3-203ENST00000494993 USF1P22415 310 aaPredicted RBP19.27■□□□□ 0.68
HDDC3-203ENST00000494993 EPHA3P29320 983 aa19.27■□□□□ 0.68
HDDC3-203ENST00000494993 P2RY4P51582 365 aa19.27■□□□□ 0.68
HDDC3-203ENST00000494993 COPZ1P61923 177 aa19.27■□□□□ 0.68
HDDC3-203ENST00000494993 MST1LQ2TV78 715 aa19.27■□□□□ 0.68
HDDC3-203ENST00000494993 TMEM225Q6GV28 225 aa19.27■□□□□ 0.68
HDDC3-203ENST00000494993 PAIP2Q9BPZ3 127 aaKnown RBP19.27■□□□□ 0.68
HDDC3-203ENST00000494993 WDR55Q9H6Y2 383 aaPredicted RBP19.27■□□□□ 0.68
HDDC3-203ENST00000494993 TMEM45AQ9NWC5 275 aa19.27■□□□□ 0.68
HDDC3-203ENST00000494993 ADPRHL2Q9NX46 363 aa19.27■□□□□ 0.68
HDDC3-203ENST00000494993 CALML5Q9NZT1 146 aa19.27■□□□□ 0.68
HDDC3-203ENST00000494993 IGHV1-18A0A0C4DH31 117 aa19.26■□□□□ 0.67
HDDC3-203ENST00000494993 PHF1O43189 567 aaPredicted RBP19.26■□□□□ 0.67
HDDC3-203ENST00000494993 FRS3O43559 492 aa19.26■□□□□ 0.67
HDDC3-203ENST00000494993 KRT33AO76009 404 aa19.26■□□□□ 0.67
HDDC3-203ENST00000494993 BCHEP06276 602 aa19.26■□□□□ 0.67
HDDC3-203ENST00000494993 ETFAP13804 333 aa19.26■□□□□ 0.67
HDDC3-203ENST00000494993 CRISP3P54108 245 aa19.26■□□□□ 0.67
HDDC3-203ENST00000494993 TBRG1Q3YBR2 411 aa19.26■□□□□ 0.67
HDDC3-203ENST00000494993 RNF220Q5VTB9 566 aa19.26■□□□□ 0.67
HDDC3-203ENST00000494993 OR1K1Q8NGR3 316 aa19.26■□□□□ 0.67
HDDC3-203ENST00000494993 SLC38A2Q96QD8 506 aa19.26■□□□□ 0.67
HDDC3-203ENST00000494993 BEX2Q9BXY8 128 aa19.26■□□□□ 0.67
HDDC3-203ENST00000494993 LPAR3Q9UBY5 353 aa19.26■□□□□ 0.67
HDDC3-203ENST00000494993 ZNF443Q9Y2A4 671 aaPredicted RBP19.26■□□□□ 0.67
HDDC3-203ENST00000494993 FKBP7Q9Y680 259 aa19.26■□□□□ 0.67
HDDC3-203ENST00000494993 TRPC5OSA6NMA1 111 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 ZNF587BE7ETH6 402 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 HDAC3O15379 428 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 VAMP5O95183 116 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 LGI1O95970 557 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 IL6P05231 212 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 CRATP43155 626 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 SELENOPP49908 381 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 PDLIM4P50479 330 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 DSTNP60981 165 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 LSM11P83369 360 aaKnown RBP eCLIP19.25■□□□□ 0.67
HDDC3-203ENST00000494993 LGALS3BPQ08380 585 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 CEP85LQ5SZL2 805 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 HHATQ5VTY9 493 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 C1orf140Q5VVS0 124 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 CREB3L2Q70SY1 520 aa19.25■□□□□ 0.67
HDDC3-203ENST00000494993 SORCS2Q96PQ0 1159 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms