RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 C17orf100A8MU93 164 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 GTPBP1O00178 669 aaKnown RBP12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 OR7A17O14581 309 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 DNPH1O43598 174 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 ZNF432O94892 652 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 RBMY1DP0C7P1 496 aaKnown RBP12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 LCN1P31025 176 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 ARR3P36575 388 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 MAP3K8P41279 467 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 SEC61A1P61619 476 aaKnown RBP12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 MERTKQ12866 999 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 HERPUD1Q15011 391 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 PFKFB4Q16877 469 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 PCGF3Q3KNV8 242 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 TMEM154Q6P9G4 183 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 PAQR6Q6TCH4 344 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 AAED1Q7RTV5 226 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 MDP1Q86V88 176 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 C1orf174Q8IYL3 243 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 IL17RDQ8NFM7 739 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 OR5W2Q8NH69 310 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 MUC7Q8TAX7 377 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 SSMEM1Q8WWF3 244 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 HOXB13Q92826 284 aaPredicted RBP12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 TMEM45BQ96B21 275 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 OTUB1Q96FW1 271 aaPredicted RBP12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 GLIPR2Q9H4G4 154 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 C16orf95Q9H693 158 aa12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 NOL11Q9H8H0 719 aaKnown RBP12.23□□□□□ -0.45
CHMP2B-205ENST00000494980 GNG14A0A1W2PPG7 69 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 TPD52L2O43399 206 aaKnown RBP12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 PCDH7O60245 1069 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 PPIAL4GP0DN37 164 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 ACP2P11117 423 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 GFAPP14136 432 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 STMN1P16949 149 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 OR2B6P58173 313 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 DR1Q01658 176 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 LCP2Q13094 533 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 CDK5R2Q13319 367 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 CBFBQ13951 182 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 SLC17A1Q14916 467 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 HEPACAMQ14CZ8 416 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 FAM219BQ5XKK7 198 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 LINGO2Q7L985 606 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 ZBED8Q8IZ13 594 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 CDKL2Q92772 493 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 ATP6V1E2Q96A05 226 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 HINT3Q9NQE9 182 aaKnown RBP12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 GIN1Q9NXP7 522 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 TXNDC16Q9P2K2 825 aa12.22□□□□□ -0.45
CHMP2B-205ENST00000494980 E7ESA3 106 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 H3BNH8 94 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 SEC31AO94979 1220 aaKnown RBP12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 PDYNP01213 254 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 CCNG1P51959 295 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 RPS23P62266 143 aaKnown RBP12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 H3F3AP84243 136 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 DLG1Q12959 904 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 DUSP5Q16690 384 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 GKAP1Q5VSY0 366 aaPredicted RBP12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 LRIG3Q6UXM1 1119 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 MEPCEQ7L2J0 689 aaKnown RBP12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 LSRQ86X29 649 aaPredicted RBP12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 CDRT4Q8N9R6 151 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 FBXO36Q8NEA4 188 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 OR4S1Q8NGB4 309 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 CCL17Q92583 94 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 FAM71F1Q96KD3 344 aaPredicted RBP12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 AMDHD1Q96NU7 426 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 ZNF385AQ96PM9 386 aaKnown RBP12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 OR11A1Q9GZK7 315 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 NPHS2Q9NP85 383 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 TAAR3PQ9P1P4 343 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 OR5V1Q9UGF6 321 aa12.21□□□□□ -0.45
CHMP2B-205ENST00000494980 HECTD4Q9Y4D8 3996 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 ZNF816-ZNF321PA0A0X1KG74 233 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 FAM187AA6NFU0 413 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 PIAS1O75925 651 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 PRPS2P11908 318 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 HOXB1P14653 301 aaPredicted RBP12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 NTSP30990 170 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 SERPINB4P48594 390 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 SESN3P58005 492 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 PDIA2Q13087 525 aaKnown RBP12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 KLHL26Q53HC5 615 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 ANKMY2Q8IV38 441 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 ZNF614Q8N883 585 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 COX18Q8N8Q8 333 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 ZIC4Q8N9L1 334 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 C16orf78Q8WTQ4 265 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 ST8SIA1Q92185 356 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 C16orf58Q96GQ5 468 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 DIRC2Q96SL1 478 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 SHCBP1LQ9BZQ2 653 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 LAT2Q9GZY6 243 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 SAP30LQ9HAJ7 183 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 DECR2Q9NUI1 292 aa12.2□□□□□ -0.46
CHMP2B-205ENST00000494980 HDGFL3Q9Y3E1 203 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms