RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ZNF208O43345 1280 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 LMX1BO60663 402 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 KRT33AO76009 404 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 GUSBP08236 651 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 NR2F1P10589 423 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 IL7RP16871 459 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 MPGP29372 298 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 IL12AP29459 219 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 PDLIM4P50479 330 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 RPL14P50914 215 aaKnown RBP11.03□□□□□ -0.64
SKA1-205ENST00000494518 CLNS1AP54105 237 aaKnown RBP11.03□□□□□ -0.64
SKA1-205ENST00000494518 PRPS1P60891 318 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 TGFBR3Q03167 851 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 MST1LQ2TV78 715 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 KRT71Q3SY84 523 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 PAQR6Q6TCH4 344 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 ZNF836Q6ZNA1 936 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 LRRC74BQ6ZQY2 392 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 ZNF621Q6ZSS3 439 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 SPATA19Q7Z5L4 167 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 VRK2Q86Y07 508 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 C17orf78Q8N4C9 275 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 C1orf162Q8NEQ5 155 aaPredicted RBP11.03□□□□□ -0.64
SKA1-205ENST00000494518 AENQ8WTP8 325 aaKnown RBP11.03□□□□□ -0.64
SKA1-205ENST00000494518 OIT3Q8WWZ8 545 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.03□□□□□ -0.64
SKA1-205ENST00000494518 PMM1Q92871 262 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 CCDC115Q96NT0 180 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 ZIM3Q96PE6 472 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 TRNT1Q96Q11 434 aaKnown RBP11.03□□□□□ -0.64
SKA1-205ENST00000494518 VRK1Q99986 396 aaPredicted RBP11.03□□□□□ -0.64
SKA1-205ENST00000494518 A0A096LPE4 126 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 IGHV4-61A0A0C4DH41 118 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 A0A1W2PPZ6 126 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 WNT11O96014 354 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 F12P00748 615 aaPredicted RBP11.02□□□□□ -0.65
SKA1-205ENST00000494518 GPIP06744 558 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 CSF3P09919 207 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 BMP4P12644 408 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 RPS4Y1P22090 263 aaKnown RBP11.02□□□□□ -0.65
SKA1-205ENST00000494518 CXCR1P25024 350 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 FKBP2P26885 142 aaKnown RBP11.02□□□□□ -0.65
SKA1-205ENST00000494518 SELENOPP49908 381 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 SWI5Q1ZZU3 235 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 DPY19L1Q2PZI1 675 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 TBRG1Q3YBR2 411 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 RPS26P11Q5JNZ5 115 aaPredicted RBP11.02□□□□□ -0.65
SKA1-205ENST00000494518 AP1ARQ63HQ0 302 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 SLC46A3Q7Z3Q1 461 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 CMIPQ8IY22 773 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 PROX1Q92786 737 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 TMEM45BQ96B21 275 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 OR52E6Q96RD3 313 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 PAIP2Q9BPZ3 127 aaKnown RBP11.02□□□□□ -0.65
SKA1-205ENST00000494518 PIMREGQ9BSJ6 248 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 PRR14Q9BWN1 585 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 SEC61A2Q9H9S3 476 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 SLC6A13Q9NSD5 602 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 LPAR3Q9UBY5 353 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.02□□□□□ -0.65
SKA1-205ENST00000494518 BTNL2Q9UIR0 455 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 KCNS2Q9ULS6 477 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 FKBP7Q9Y680 259 aa11.02□□□□□ -0.65
SKA1-205ENST00000494518 V9GYY5 206 aaPredicted RBP11.02□□□□□ -0.65
SKA1-205ENST00000494518 LOC100289279A0A1B0GTE1 492 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 AQP7P3A6NL99 342 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 SDHDO14521 159 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 RGS16O15492 202 aaPredicted RBP11.01□□□□□ -0.65
SKA1-205ENST00000494518 DBIP07108 87 aaKnown RBP11.01□□□□□ -0.65
SKA1-205ENST00000494518 PRG2P13727 222 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 APEHP13798 732 aaKnown RBP11.01□□□□□ -0.65
SKA1-205ENST00000494518 ETFAP13804 333 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 UQCRBP14927 111 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 SRD5A1P18405 259 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 NR4A2P43354 598 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 GZMKP49863 264 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 SNRPD2P62316 118 aaKnown RBP11.01□□□□□ -0.65
SKA1-205ENST00000494518 GNA13Q14344 377 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 MAPK11Q15759 364 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 IQCCQ4KMZ1 466 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 TMEM225Q6GV28 225 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 FAM166AQ6J272 317 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 NIPAL3Q6P499 406 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 LINGO2Q7L985 606 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 PEX5LQ8IYB4 626 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 KDM8Q8N371 416 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 TRIML2Q8N7C3 387 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 POMGNT2Q8NAT1 580 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 OR1K1Q8NGR3 316 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 OR52P1PQ8NH57 321 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 MSI2Q96DH6 328 aaKnown RBP11.01□□□□□ -0.65
SKA1-205ENST00000494518 FOXN4Q96NZ1 517 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 SLC38A2Q96QD8 506 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 KCNS3Q9BQ31 491 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 C19orf24Q9BVV8 132 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 TAPBPLQ9BX59 468 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 ADAM19Q9H013 955 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 CENPHQ9H3R5 247 aa11.01□□□□□ -0.65
SKA1-205ENST00000494518 MTHFD2LQ9H903 347 aaPredicted RBP11.01□□□□□ -0.65
SKA1-205ENST00000494518 MEAF6Q9HAF1 191 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms