RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 PET117Q6UWS5 81 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 ASCL4Q6XD76 172 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 GLDNQ6ZMI3 551 aaPredicted RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 HIST3H2AQ7L7L0 130 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 TRMT11Q7Z4G4 463 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 ADHFE1Q8IWW8 467 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 SKA3Q8IX90 412 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 ZBTB44Q8NCP5 570 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 OR6X1Q8NH79 312 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 ZNF431Q8TF32 576 aaPredicted RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 KAT2AQ92830 837 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 HIST1H2ACQ93077 130 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 PABPC5Q96DU9 382 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 PERPQ96FX8 193 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 GPX7Q96SL4 187 aaPredicted RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 GPA33Q99795 319 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 DCUN1D5Q9BTE7 237 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 PHF7Q9BWX1 381 aaPredicted RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 SLC35C2Q9NQQ7 365 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 LHX3Q9UBR4 397 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 TRMT6Q9UJA5 497 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 ZNF490Q9ULM2 529 aaPredicted RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 RCE1Q9Y256 329 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 AAR2Q9Y312 384 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 DHRS7Q9Y394 339 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 TIMM10BQ9Y5J6 103 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 SNRNP200O75643 2136 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 OR6C68A6NDL8 312 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 NEMP2A6NFY4 417 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 MCRIP1C9JLW8 97 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 BHLHE40O14503 412 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 ANGPT2O15123 496 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 PRKYO43930 277 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 PSIP1O75475 530 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 ERAL1O75616 437 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 RPP40O75818 363 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 AK1P00568 194 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 IGLV3-1P01715 115 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 TK1P04183 234 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 APRTP07741 180 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 SRPRAP08240 638 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 UCHL1P09936 223 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 IGFBP3P17936 291 aaPredicted RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 ATP5A1P25705 553 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 PBLDP30039 288 aaPredicted RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 IFNA8P32881 189 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 IFNGR2P38484 337 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 THPOP40225 353 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 RFC3P40938 356 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 ETV5P41161 510 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 SOX3P41225 446 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 PLK1P53350 603 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 IST1P53990 364 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 CTBP2P56545 445 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 RPS4XP62701 263 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 RAB40BQ12829 278 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 GPR176Q14439 515 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 LASP1Q14847 261 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 CDK5R1Q15078 307 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 DUOXA1Q1HG43 343 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 SYT14P1Q58G82 188 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 ZNF793Q6ZN11 406 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 LINGO2Q7L985 606 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 C5orf24Q7Z6I8 188 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 METTL23Q86XA0 190 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 YAF2Q8IY57 180 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 TCAIMQ8N3R3 496 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 SLC30A7Q8NEW0 376 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 THEM6Q8WUY1 208 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 CNOT9Q92600 299 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 PROX1Q92786 737 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 APOL4Q9BPW4 351 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 WFDC6Q9BQY6 131 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 TMED9Q9BVK6 235 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 RHBGQ9H310 441 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 RANBP3Q9H6Z4 567 aaPredicted RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 ACTR8Q9H981 624 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 SNTG1Q9NSN8 517 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 FAM120CQ9NX05 1096 aaKnown RBP2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 TAS2R3Q9NYW6 316 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 STEAP1Q9UHE8 339 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 TEKT2Q9UIF3 430 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 SCP2D1Q9UJQ7 156 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 FZD4Q9ULV1 537 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 PLCL2Q9UPR0 1127 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 SCML2Q9UQR0 700 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 TPRKBQ9Y3C4 175 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 DNAH1Q9P2D7 4330 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 A0A0G2JPF8 293 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 MTMR11A4FU01 709 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 FAM90A18PA6NE21 464 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 FAM90A16PA6NEW6 464 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 TRABD2BA6NFA1 517 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 ZNF860A6NHJ4 632 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 FAM90A20PA6NIJ5 464 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 FAM90A9PA6NNJ1 464 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 A8MXE2 369 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 FAM90A5PA8MXJ8 464 aa2.29□□□□□ -2.04
CDC42EP3-205ENST00000494083 HNRNPCL3B7ZW38 293 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms