RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 AP3S1Q92572 193 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 OTULINQ96BN8 352 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 MTFMTQ96DP5 389 aaKnown RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 L3HYPDHQ96EM0 354 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 SLC47A1Q96FL8 570 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 LURAP1Q96LR2 239 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 NEDD4LQ96PU5 975 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 MTERF1Q99551 399 aaKnown RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 C12orf57Q99622 126 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 EFCAB11Q9BUY7 163 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 MND1Q9BWT6 205 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 PROK2Q9HC23 129 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 LYRM4Q9HD34 91 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 SLC35C2Q9NQQ7 365 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 BIN3Q9NQY0 253 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 NUDT4Q9NZJ9 180 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 MYOTQ9UBF9 498 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 SLC23A1Q9UHI7 598 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 PFDN2Q9UHV9 154 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 MRPS7Q9Y2R9 242 aaKnown RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 KLF13Q9Y2Y9 288 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 YARS2Q9Y2Z4 477 aaKnown RBP7.46□□□□□ -1.22
HDAC6-234ENST00000493923 CMAHPQ9Y471 501 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 ATG4BQ9Y4P1 393 aa7.46□□□□□ -1.22
HDAC6-234ENST00000493923 MPDZO75970 2070 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF469Q96JG9 3925 aaPredicted RBP7.45□□□□□ -1.22
HDAC6-234ENST00000493923 A0A1W2PQ09 198 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 RPS10-NUDT3A0A1W2PQS6 291 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 FAM234BA2RU67 622 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 NKX2-6A6NCS4 301 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 GLOD5A6NK44 160 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 MPTX1A8MV57 137 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 KDM4EB2RXH2 506 aaPredicted RBP7.45□□□□□ -1.22
HDAC6-234ENST00000493923 E9PLN8 166 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 PPP6CO00743 305 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 ANKRD28O15084 1053 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 GLSO94925 669 aaPredicted RBP7.45□□□□□ -1.22
HDAC6-234ENST00000493923 CLDN14O95500 239 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 LGI1O95970 557 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 GBAP04062 536 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 IGKV3-11P04433 115 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 LTA4HP09960 611 aaKnown RBP7.45□□□□□ -1.22
HDAC6-234ENST00000493923 RFPL3SP0C7P2 107 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 SMIM6P0DI80 62 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 CAPN3P20807 821 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 BSGP35613 385 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 PIGAP37287 484 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 SSR2P43308 183 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 DNASE1L1P49184 302 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 MEOX2P50222 304 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 RNF4P78317 190 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 PIGFQ07326 219 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 RCAN2Q14206 197 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 PFKFB4Q16877 469 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 TATDN3Q17R31 274 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 FAM76BQ5HYJ3 339 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 KHDRBS2Q5VWX1 349 aaKnown RBP7.45□□□□□ -1.22
HDAC6-234ENST00000493923 TRIQKQ629K1 86 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 KANK2Q63ZY3 851 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 RTL6Q6ICC9 239 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 OR4C11Q6IEV9 310 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 MRM1Q6IN84 353 aaKnown RBP7.45□□□□□ -1.22
HDAC6-234ENST00000493923 GRHL2Q6ISB3 625 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 MED27Q6P2C8 311 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 TMEM64Q6YI46 380 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 GOLGA7Q7Z5G4 137 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 MMP21Q8N119 569 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 TMEM132CQ8N3T6 1108 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 TMEM251Q8N6I4 163 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 HORMAD2Q8N7B1 307 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 OR4D10Q8NGI6 311 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 OR5M9Q8NGP3 310 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 OR9Q1Q8NGQ5 310 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 CDC26Q8NHZ8 85 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 STAG3L4Q8TBR4 150 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 FAM110BQ8TC76 370 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 MTERF3Q96E29 417 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 SENP5Q96HI0 755 aaPredicted RBP7.45□□□□□ -1.22
HDAC6-234ENST00000493923 NSUN5Q96P11 429 aaKnown RBP7.45□□□□□ -1.22
HDAC6-234ENST00000493923 SORCS2Q96PQ0 1159 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 KCNC2Q96PR1 638 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 CDK15Q96Q40 435 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 VKORC1Q9BQB6 163 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 TCEAL7Q9BRU2 100 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 COPS4Q9BT78 406 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 TBCDQ9BTW9 1192 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 GSX2Q9BZM3 304 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 PPIL3Q9H2H8 161 aaKnown RBP7.45□□□□□ -1.22
HDAC6-234ENST00000493923 ELOVL6Q9H5J4 265 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 ACTR8Q9H981 624 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 IL1RL2Q9HB29 575 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 SH2D2AQ9NP31 389 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 DMRT3Q9NQL9 472 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 POLE3Q9NRF9 147 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 KRT84Q9NSB2 600 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 RBFOX1Q9NWB1 397 aaKnown RBP7.45□□□□□ -1.22
HDAC6-234ENST00000493923 RDH8Q9NYR8 311 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 ENOPH1Q9UHY7 261 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 PPT2Q9UMR5 302 aa7.45□□□□□ -1.22
HDAC6-234ENST00000493923 ABCG2Q9UNQ0 655 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms