RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 MARCH9Q86YJ5 346 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 GABRG1Q8N1C3 465 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 PQLC3Q8N755 202 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 SUMF1Q8NBK3 374 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 CATSPER1Q8NEC5 780 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 BBS1Q8NFJ9 593 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 OR2T33Q8NG76 320 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 OR4F6Q8NGB9 312 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 OR13F1Q8NGS4 319 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 GPR151Q8TDV0 419 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 HTR3CQ8WXA8 447 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 ARNTL2Q8WYA1 636 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 ZNF501Q96CX3 271 aaPredicted RBP3.61□□□□□ -1.83
GTF3A-208ENST00000493903 PLEKHA8Q96JA3 519 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 ZNF641Q96N77 438 aaPredicted RBP3.61□□□□□ -1.83
GTF3A-208ENST00000493903 KCNA7Q96RP8 456 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 HCAR1Q9BXC0 346 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 ANKRD60Q9BZ19 345 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 OPN3Q9H1Y3 402 aaPredicted RBP3.61□□□□□ -1.83
GTF3A-208ENST00000493903 BLZF1Q9H2G9 400 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 PPA2Q9H2U2 334 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 FGF22Q9HCT0 170 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 CHRAC1Q9NRG0 131 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 NUP50Q9UKX7 468 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 CFAP45Q9UL16 551 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 COPS3Q9UNS2 423 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 MRPL11Q9Y3B7 192 aaKnown RBP3.61□□□□□ -1.83
GTF3A-208ENST00000493903 L3MBTL1Q9Y468 752 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 ANKRD50Q9ULJ7 1429 aa3.61□□□□□ -1.83
GTF3A-208ENST00000493903 RALGAPBQ86X10 1494 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 SLIT2O94813 1529 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 CDC42BPGQ6DT37 1551 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 IQANK1A0A1B0GTG1 560 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 A8MXQ7 604 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 IDSB3KWA1 339 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 HIP1O00291 1037 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 CLOCKO15516 846 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 PRKYO43930 277 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 LYPD3O95274 346 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 IGLV1-44P01699 117 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 LGALS2P05162 132 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 SERPIND1P05546 499 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 IVLP07476 585 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 ZSCAN5DPP0CG00 497 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 ZNF24P17028 368 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 ZNF26P17031 533 aaPredicted RBP3.6□□□□□ -1.83
GTF3A-208ENST00000493903 ZNF43P17038 809 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 BCL3P20749 454 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 LMO2P25791 158 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 RRM2P31350 389 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 IFNA8P32881 189 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 ACVR1BP36896 505 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 XCR1P46094 333 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 RPS5P46782 204 aaKnown RBP3.6□□□□□ -1.83
GTF3A-208ENST00000493903 OR1D4P47884 311 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 HLCSP50747 726 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 PRKXP51817 358 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 YWHAGP61981 247 aaKnown RBP eCLIP3.6□□□□□ -1.83
GTF3A-208ENST00000493903 VGLL4Q14135 290 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 KCNJ11Q14654 390 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 SIX1Q15475 284 aaPredicted RBP3.6□□□□□ -1.83
GTF3A-208ENST00000493903 TGFBIQ15582 683 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 STK11Q15831 433 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 MICAQ29983 383 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 ISXQ2M1V0 245 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 CNPY1Q3B7I2 92 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 FBXO48Q5FWF7 155 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 RFWD3Q6PCD5 774 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 LRRC31Q6UY01 552 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 DEFB132Q7Z7B7 95 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 LRRC49Q8IUZ0 686 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 CCDC65Q8IXS2 484 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 ATP6V0D2Q8N8Y2 350 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 Q8N9P0 234 aaPredicted RBP3.6□□□□□ -1.83
GTF3A-208ENST00000493903 HCAR2Q8TDS4 363 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 GPX8Q8TED1 209 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 ZBTB9Q96C00 473 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 CELF6Q96J87 481 aaKnown RBP3.6□□□□□ -1.83
GTF3A-208ENST00000493903 ATF6BQ99941 703 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 P2RY13Q9BPV8 354 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 RGCCQ9H4X1 137 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 REEP4Q9H6H4 257 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 LYARQ9NX58 379 aaKnown RBP3.6□□□□□ -1.83
GTF3A-208ENST00000493903 TMCO1Q9UM00 188 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 RNF24Q9Y225 148 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 MRPS28Q9Y2Q9 187 aaKnown RBP3.6□□□□□ -1.83
GTF3A-208ENST00000493903 BRWD3Q6RI45 1802 aa3.6□□□□□ -1.83
GTF3A-208ENST00000493903 USP32Q8NFA0 1604 aa3.59□□□□□ -1.83
GTF3A-208ENST00000493903 A0A087X002 238 aa3.59□□□□□ -1.83
GTF3A-208ENST00000493903 A0A0J9YYE9 177 aa3.59□□□□□ -1.83
GTF3A-208ENST00000493903 FCN1O00602 326 aa3.59□□□□□ -1.83
GTF3A-208ENST00000493903 DLGAP1O14490 977 aa3.59□□□□□ -1.83
GTF3A-208ENST00000493903 CHMP2AO43633 222 aa3.59□□□□□ -1.83
GTF3A-208ENST00000493903 TRBC1P01850 177 aa3.59□□□□□ -1.83
GTF3A-208ENST00000493903 MMP1P03956 469 aa3.59□□□□□ -1.83
GTF3A-208ENST00000493903 P04436 131 aa3.59□□□□□ -1.83
GTF3A-208ENST00000493903 SERPINB2P05120 415 aa3.59□□□□□ -1.83
GTF3A-208ENST00000493903 UBTFL6P0CB48 400 aaPredicted RBP3.59□□□□□ -1.83
GTF3A-208ENST00000493903 CT45A10P0DMU9 189 aa3.59□□□□□ -1.83
GTF3A-208ENST00000493903 UMPSP11172 480 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms