RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 IGHEP01854 428 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 CD14P08571 375 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 ZNF806P0C7X5 589 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 MSX1P28360 303 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 UQCRC1P31930 480 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 AQP2P41181 271 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 RPS3AP61247 264 aaKnown RBP12.76□□□□□ -0.37
PTPN7-216ENST00000492977 LTBQ06643 244 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 LGALS3BPQ08380 585 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 BTBD16Q32M84 506 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 BRICD5Q6PL45 260 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 ZNF322Q6U7Q0 402 aaPredicted RBP12.76□□□□□ -0.37
PTPN7-216ENST00000492977 C5orf46Q6UWT4 87 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 IGFN1Q86VF2 1251 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 NAXDQ8IW45 347 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 LRRC75AQ8NAA5 344 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 CYB561A3Q8NBI2 242 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 GALNT6Q8NCL4 622 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 MOSPD2Q8NHP6 518 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 STK35Q8TDR2 534 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 S100ZQ8WXG8 99 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 ST8SIA1Q92185 356 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 TM9SF4Q92544 642 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 UFD1Q92890 307 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 TAAR8Q969N4 342 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 IMMP1LQ96LU5 166 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 DDOQ99489 341 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 MMP27Q9H306 513 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 SDHAF3Q9NRP4 125 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 ADAM18Q9Y3Q7 739 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 LOXL2Q9Y4K0 774 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 B3GALT1Q9Y5Z6 326 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 RALGAPA1Q6GYQ0 2036 aa12.76□□□□□ -0.37
PTPN7-216ENST00000492977 VCANP13611 3396 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 DAPL1A0PJW8 107 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 ZC3H12DA2A288 527 aaKnown RBP12.75□□□□□ -0.37
PTPN7-216ENST00000492977 C17orf51A8MQB3 221 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 C12orf71A8MTZ7 269 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 A8MVM7 634 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 SUSD5O60279 629 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 NPIPB7O75200 414 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 OR2J2O76002 312 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 BGLAPP02818 100 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 SBK2P0C263 348 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 SLC16A1P53985 500 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 DLX5P56178 289 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 ERVK-25P63136 954 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 BDH1Q02338 343 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 GALEQ14376 348 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 NTRK2Q16620 822 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 ZNF404Q494X3 552 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 SOWAHCQ53LP3 525 aaPredicted RBP12.75□□□□□ -0.37
PTPN7-216ENST00000492977 ALG10Q5BKT4 473 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 EMC4Q5J8M3 183 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 SLC35D3Q5M8T2 416 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 LCN1P1Q5VSP4 162 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 B3GLCTQ6Y288 498 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 ADGRG3Q86Y34 549 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 NPEPL1Q8NDH3 523 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 OR6Q1Q8NGQ2 317 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 MCFD2Q8NI22 146 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 M1APQ8TC57 530 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 HS3ST6Q96QI5 342 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 KATNB1Q9BVA0 655 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 RNF167Q9H6Y7 350 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 EXOSC4Q9NPD3 245 aaKnown RBP12.75□□□□□ -0.37
PTPN7-216ENST00000492977 TMED7Q9Y3B3 224 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 KIF26BQ2KJY2 2108 aa12.75□□□□□ -0.37
PTPN7-216ENST00000492977 PCNX3Q9H6A9 2034 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 METTL15A6NJ78 407 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 CLDN25C9JDP6 229 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 CBFA2T3O75081 653 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 STK17BO94768 372 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 TXNDC12O95881 172 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 F12P00748 615 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-216ENST00000492977 CLUP10909 449 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 COX6A1P12074 109 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 GABRA5P31644 462 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 SOX6P35712 828 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 OPRL1P41146 370 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 FOLR3P41439 243 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 RPS5P46782 204 aaKnown RBP12.74□□□□□ -0.37
PTPN7-216ENST00000492977 CAPZA2P47755 286 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 CTXN1P60606 82 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 ACTC1P68032 377 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 ACTA1P68133 377 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 GPR50Q13585 617 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 IL10RAQ13651 578 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 GGTLC2Q14390 218 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 PON3Q15166 354 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 GXYLT1Q4G148 440 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 FAM69BQ5VUD6 431 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 MAMDC2Q7Z304 686 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-216ENST00000492977 FAM122BQ7Z309 247 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 NANOGNBQ7Z5D8 188 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 ZBTB46Q86UZ6 589 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 TMEM99Q8N816 258 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 POMGNT2Q8NAT1 580 aa12.74□□□□□ -0.37
PTPN7-216ENST00000492977 SDR9C7Q8NEX9 313 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms