RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 NSMCE2Q96MF7 247 aa12.44□□□□□ -0.42
CCM2-217ENST00000492883 ZNF300Q96RE9 604 aaPredicted RBP12.44□□□□□ -0.42
CCM2-217ENST00000492883 TMEM43Q9BTV4 400 aa12.44□□□□□ -0.42
CCM2-217ENST00000492883 PTDSS2Q9BVG9 487 aa12.44□□□□□ -0.42
CCM2-217ENST00000492883 AMBRA1Q9C0C7 1298 aa12.44□□□□□ -0.42
CCM2-217ENST00000492883 RIMS3Q9UJD0 308 aa12.44□□□□□ -0.42
CCM2-217ENST00000492883 PRPF19Q9UMS4 504 aaKnown RBP12.44□□□□□ -0.42
CCM2-217ENST00000492883 MYO7BQ6PIF6 2116 aa12.44□□□□□ -0.42
CCM2-217ENST00000492883 FREM3P0C091 2139 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 ZNF724A8MTY0 619 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 ZNF814B7Z6K7 855 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 GPR171O14626 319 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 ARPC2O15144 300 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 RAMP1O60894 148 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 THY1P04216 161 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 ST3GAL3Q11203 375 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 SNTB1Q13884 538 aaKnown RBP12.43□□□□□ -0.42
CCM2-217ENST00000492883 FXNQ16595 210 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 EXOC3L2Q2M3D2 409 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 ABLIM2Q6H8Q1 611 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 ZNF474Q6S9Z5 364 aaPredicted RBP12.43□□□□□ -0.42
CCM2-217ENST00000492883 LINC00114Q6XXX2 140 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 GALNT5Q7Z7M9 940 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 GPAT4Q86UL3 456 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 SPOCK3Q9BQ16 436 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 THTPAQ9BU02 230 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 FNDC11Q9BVV2 318 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 ENKD1Q9H0I2 346 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 GALNT8Q9NY28 637 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 ING1Q9UK53 422 aaPredicted RBP12.43□□□□□ -0.42
CCM2-217ENST00000492883 NOSIPQ9Y314 301 aaKnown RBP12.43□□□□□ -0.42
CCM2-217ENST00000492883 FAM32AQ9Y421 112 aaKnown RBP12.43□□□□□ -0.42
CCM2-217ENST00000492883 V9GYQ6 96 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 HELZ2Q9BYK8 2649 aaKnown RBP12.43□□□□□ -0.42
CCM2-217ENST00000492883 MED12Q93074 2177 aa12.43□□□□□ -0.42
CCM2-217ENST00000492883 PRRC2CQ9Y520 2896 aaKnown RBP12.43□□□□□ -0.42
CCM2-217ENST00000492883 IGKV3D-15A0A087WSY6 115 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 AQP7P3A6NL99 342 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 ZNF716A6NP11 495 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 FTCDNL1E5RQL4 147 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 KPNA4O00629 521 aaPredicted RBP12.42□□□□□ -0.42
CCM2-217ENST00000492883 HNRNPRO43390 633 aaKnown RBP12.42□□□□□ -0.42
CCM2-217ENST00000492883 PDE5AO76074 875 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 LYPD3O95274 346 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 THRBP10828 461 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 POU2F1P14859 743 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 GRPRP30550 384 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 PEX19P40855 299 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 SLC16A1P53985 500 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 FAM27E3Q08E93 113 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 MFSD13AQ14CX5 517 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 DNAL1Q4LDG9 190 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 ZNF787Q6DD87 383 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 WDR88Q6ZMY6 472 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 CYP4Z1Q86W10 505 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 DMRTC2Q8IXT2 367 aaPredicted RBP12.42□□□□□ -0.42
CCM2-217ENST00000492883 ZNF100Q8IYN0 542 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 OR6S1Q8NH40 331 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 PYURFQ96I23 114 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 PRRC1Q96M27 445 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 PRSS27Q9BQR3 290 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 SF3B5Q9BWJ5 86 aaKnown RBP12.42□□□□□ -0.42
CCM2-217ENST00000492883 FANCFQ9NPI8 374 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 ELOVL5Q9NYP7 299 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 RHCGQ9UBD6 479 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 A4GNTQ9UNA3 340 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 RASD1Q9Y272 281 aa12.42□□□□□ -0.42
CCM2-217ENST00000492883 J3KTA2 159 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 M0R082 166 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 MRPL33O75394 65 aaKnown RBP12.41□□□□□ -0.42
CCM2-217ENST00000492883 VAMP5O95183 116 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 STAMBPO95630 424 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 NQO1P15559 274 aaKnown RBP12.41□□□□□ -0.42
CCM2-217ENST00000492883 CD79BP40259 229 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 KIR2DL3P43628 341 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 IL1RL1Q01638 556 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 BNIP1Q12981 228 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 SLC17A1Q14916 467 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 CYP2R1Q6VVX0 501 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 BEND4Q6ZU67 534 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 H1FNTQ75WM6 255 aaPredicted RBP12.41□□□□□ -0.42
CCM2-217ENST00000492883 DHFR2Q86XF0 187 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 NKAIN4Q8IVV8 208 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 KDM8Q8N371 416 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 ZNF417Q8TAU3 575 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 TMEM239Q8WW34 195 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 MCUR1Q96AQ8 359 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 CLPTM1LQ96KA5 538 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 HS6ST2Q96MM7 605 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 ZNF587Q96SQ5 575 aaPredicted RBP12.41□□□□□ -0.42
CCM2-217ENST00000492883 BTBD10Q9BSF8 475 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 ASPNQ9BXN1 380 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 SLC19A3Q9BZV2 496 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 KLHL4Q9C0H6 718 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 MUC13Q9H3R2 512 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 SLC24A3Q9HC58 644 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 ACTR3BQ9P1U1 418 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 B3GALT5Q9Y2C3 310 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 CORINQ9Y5Q5 1042 aa12.41□□□□□ -0.42
CCM2-217ENST00000492883 ENPP4Q9Y6X5 453 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms