RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 GABRA6Q16445 453 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 ZNF672Q499Z4 452 aaPredicted RBP13.2□□□□□ -0.3
TOM1-215ENST00000491987 GLIPR1L2Q4G1C9 344 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 PRSS57Q6UWY2 283 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 DLEU7Q6UYE1 221 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 SSX8Q7RTT4 187 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 DHDDSQ86SQ9 333 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 KRT73Q86Y46 540 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 STK35Q8TDR2 534 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 TMEM45BQ96B21 275 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 ZNF385AQ96PM9 386 aaKnown RBP13.2□□□□□ -0.3
TOM1-215ENST00000491987 SPATA5L1Q9BVQ7 753 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 SF3B5Q9BWJ5 86 aaKnown RBP13.2□□□□□ -0.3
TOM1-215ENST00000491987 ZNF385DQ9H6B1 395 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 TMEM38AQ9H6F2 299 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 RPS6KB2Q9UBS0 482 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 LEF1Q9UJU2 399 aaPredicted RBP13.2□□□□□ -0.3
TOM1-215ENST00000491987 TRIM33Q9UPN9 1127 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 GMEB1Q9Y692 573 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 MTORP42345 2549 aa13.2□□□□□ -0.3
TOM1-215ENST00000491987 FLNAP21333 2647 aaKnown RBP13.2□□□□□ -0.3
TOM1-215ENST00000491987 DSCAMO60469 2012 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 A0A0G2JND7 137 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 TRIM64A6NGJ6 449 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 TRIM64BA6NI03 449 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 ELOA3DA6NLF2 546 aaPredicted RBP13.19□□□□□ -0.3
TOM1-215ENST00000491987 H7C1Q1 480 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 PDLIM1O00151 329 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 ANGPT2O15123 496 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 NPIPB7O75200 414 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 SOD3P08294 240 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 GPX2P18283 190 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 SLC6A2P23975 617 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 RPS4XP62701 263 aaKnown RBP13.19□□□□□ -0.3
TOM1-215ENST00000491987 ELOA3BQ3SY89 546 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 RUNDC3AQ59EK9 446 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 TMEM225Q6GV28 225 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 DHRS4L2Q6PKH6 230 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 AAED1Q7RTV5 226 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 BIVMQ86UB2 503 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 CIARTQ8N365 385 aaPredicted RBP13.19□□□□□ -0.3
TOM1-215ENST00000491987 ZIC4Q8N9L1 334 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 ELOA3Q8NG57 546 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 SMAP2Q8WU79 429 aaPredicted RBP13.19□□□□□ -0.3
TOM1-215ENST00000491987 SLC25A36Q96CQ1 311 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 PRR14Q9BWN1 585 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 TRIM2Q9C040 744 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 ZNF701Q9NV72 531 aaPredicted RBP13.19□□□□□ -0.3
TOM1-215ENST00000491987 NDUFAF1Q9Y375 327 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 SLC25A15Q9Y619 301 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 PRR14LQ5THK1 2151 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 ZFHX3Q15911 3703 aa13.19□□□□□ -0.3
TOM1-215ENST00000491987 MAP1AP78559 2803 aaPredicted RBP13.19□□□□□ -0.3
TOM1-215ENST00000491987 C2CD3Q4AC94 2353 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 ACANP16112 2415 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 A0A1B0GWA3 101 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 FTCDNL1E5RQL4 147 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 ABCD4O14678 606 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 TPST1O60507 370 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 TMCC2O75069 709 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 DANCRP0C864 163 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 PNMTP11086 282 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 PAX1P15863 534 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 HTR2AP28223 471 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 RPS5P46782 204 aaKnown RBP13.18□□□□□ -0.3
TOM1-215ENST00000491987 P2RY4P51582 365 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 CDH11P55287 796 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 ATP5J2P56134 94 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 RGS8P57771 180 aaPredicted RBP13.18□□□□□ -0.3
TOM1-215ENST00000491987 MTPNP58546 118 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 EGR4Q05215 589 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 SELPLGQ14242 412 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 ADRM1Q16186 407 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 OR7E24Q6IFN5 339 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 Q71RC1 249 aaPredicted RBP13.18□□□□□ -0.3
TOM1-215ENST00000491987 RETREG3Q86VR2 466 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 PIAS4Q8N2W9 510 aaPredicted RBP13.18□□□□□ -0.3
TOM1-215ENST00000491987 HIPK4Q8NE63 616 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 KTI12Q96EK9 354 aaPredicted RBP13.18□□□□□ -0.3
TOM1-215ENST00000491987 MUS81Q96NY9 551 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 ZNF607Q96SK3 696 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 SIKE1Q9BRV8 207 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 PTDSS2Q9BVG9 487 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 SLCO5A1Q9H2Y9 848 aa13.18□□□□□ -0.3
TOM1-215ENST00000491987 MAGED1Q9Y5V3 778 aaPredicted RBP13.18□□□□□ -0.3
TOM1-215ENST00000491987 PRORSD1PA6NEY8 169 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 SHISA9B4DS77 424 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 M0R1B8 84 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 SMAD7O15105 426 aaKnown RBP13.17□□□□□ -0.3
TOM1-215ENST00000491987 VAMP5O95183 116 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 GTF2E2P29084 291 aaKnown RBP13.17□□□□□ -0.3
TOM1-215ENST00000491987 CDKN1AP38936 164 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 NCALDP61601 193 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 SLC25A3Q00325 362 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 SPOCK1Q08629 439 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 NFYCQ13952 458 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 CYP51A1Q16850 503 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 ALG10BQ5I7T1 473 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 C6orf89Q6UWU4 347 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 TMEM108Q6UXF1 575 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms