RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 PCYT1AP49585 367 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SLC16A1P53985 500 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 EXOC3L2Q2M3D2 409 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TFAP2EQ6VUC0 442 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 DEF8Q6ZN54 512 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CBLL1Q75N03 491 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 GDF7Q7Z4P5 450 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TSPYL5Q86VY4 417 aaPredicted RBP14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 DEFB107AQ8IZN7 70 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 RNF148Q8N7C7 305 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TMEM99Q8N816 258 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ZNF775Q96BV0 537 aaPredicted RBP14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 EPYCQ99645 322 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TMEM43Q9BTV4 400 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 POLR2J2Q9GZM3 115 aaKnown RBP14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 POLR2J3Q9H1A7 115 aaKnown RBP14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 KCNN3Q9UGI6 736 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 EGFL7Q9UHF1 273 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SLC7A7Q9UM01 511 aa14.47□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 B2RBV5 119 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 FTCDNL1E5RQL4 147 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 GPR171O14626 319 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 OR2T1O43869 369 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 LYPD3O95274 346 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 THY1P04216 161 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 HSD17B1P14061 328 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TCN1P20061 433 aaPredicted RBP14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 PTNP21246 168 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TAS2R41P59536 307 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 FAM27E3Q08E93 113 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 FAM69AQ5T7M9 428 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 BEND4Q6ZU67 534 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 VTCN1Q7Z7D3 282 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 GALNT5Q7Z7M9 940 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 P3H2Q8IVL5 708 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 ZNF295-AS1Q8N0V1 137 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TAAR8Q969N4 342 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 SLC25A36Q96CQ1 311 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 CDRT15Q96T59 188 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 FANCFQ9NPI8 374 aa14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 NOSIPQ9Y314 301 aaKnown RBP14.46□□□□□ -0.09
MSH5-SAPCD1-206ENST00000491552 TUBAL3A6NHL2 446 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 FZD7O75084 574 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 FLNBO75369 2602 aaKnown RBP14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 GMNNO75496 209 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 OR5F1O95221 314 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 PRF1P14222 555 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 OR3A2P47893 321 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 P2RY4P51582 365 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 SLC17A1Q14916 467 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 SPATS1Q496A3 300 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 GLYATQ6IB77 296 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 TTC33Q6PID6 262 aaPredicted RBP14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 LINC00114Q6XXX2 140 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 WDR88Q6ZMY6 472 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 TRPM8Q7Z2W7 1104 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 FAM156AQ8NDB6 213 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 RBM15BQ8NDT2 890 aaKnown RBP14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 OR6S1Q8NH40 331 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 FAM222BQ8WU58 562 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 GEMIN6Q8WXD5 167 aaKnown RBP14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 C14orf79Q96F83 325 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 SLC41A3Q96GZ6 507 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 MPP4Q96JB8 637 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 SF3B5Q9BWJ5 86 aaKnown RBP14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 CRIM1Q9NZV1 1036 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 C6orf203Q9P0P8 240 aaPredicted RBP14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 CD300AQ9UGN4 299 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 MAGEL2Q9UJ55 1249 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 RPS6KA6Q9UK32 745 aa14.45□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 CYSRT1A8MQ03 144 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 C16orf97H3BN30 126 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 SSTR2P30874 369 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 CCKARP32238 428 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 UGT2B10P36537 528 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 MFSD13AQ14CX5 517 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 FXNQ16595 210 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 IFI44LQ53G44 452 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 TMEM225Q6GV28 225 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 FKBP9P1Q75LS8 142 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 GPAT4Q86UL3 456 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ZNF100Q8IYN0 542 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 OR9K2Q8NGE7 335 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 LINC01560Q8TB33 94 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 HSH2DQ96JZ2 352 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 KLHL4Q9C0H6 718 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 RIMS3Q9UJD0 308 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 RASD1Q9Y272 281 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 FLVCR1Q9Y5Y0 555 aa14.44□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 SH3D21A4FU49 640 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 M0R082 166 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 VAMP5O95183 116 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 BGLAPP02818 100 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 IFNW1P05000 195 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 T-ENOLP0DO92 83 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 CBLP22681 906 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 GRPRP30550 384 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 PIN1Q13526 163 aaPredicted RBP14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 CASP12Q6UXS9 341 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 STAC2Q6ZMT1 411 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms