RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 LINC00471Q8N535 108 aa12.8□□□□□ -0.36
CLDN11-209ENST00000489485 PIGXQ8TBF5 258 aa12.8□□□□□ -0.36
CLDN11-209ENST00000489485 STK35Q8TDR2 534 aa12.8□□□□□ -0.36
CLDN11-209ENST00000489485 NIPSNAP1Q9BPW8 284 aa12.8□□□□□ -0.36
CLDN11-209ENST00000489485 TMEM43Q9BTV4 400 aa12.8□□□□□ -0.36
CLDN11-209ENST00000489485 OSBPL10Q9BXB5 764 aa12.8□□□□□ -0.36
CLDN11-209ENST00000489485 KLHL4Q9C0H6 718 aa12.8□□□□□ -0.36
CLDN11-209ENST00000489485 PNPLA3Q9NST1 481 aa12.8□□□□□ -0.36
CLDN11-209ENST00000489485 SULT2B1O00204 365 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 BCKDKO14874 412 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 SLC19A2O60779 497 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 AHSA1O95433 338 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 ALPLP05186 524 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 IFI30P13284 250 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 IFNGR2P38484 337 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 GPR4P46093 362 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 OMPP47874 163 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 CLK1P49759 484 aaKnown RBP12.79□□□□□ -0.36
CLDN11-209ENST00000489485 ALDH3A2P51648 485 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 CLDN15P56746 228 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 RPS3AP61247 264 aaKnown RBP12.79□□□□□ -0.36
CLDN11-209ENST00000489485 PPP2R2BQ00005 443 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 CTU2Q2VPK5 515 aaKnown RBP12.79□□□□□ -0.36
CLDN11-209ENST00000489485 PDSS1Q5T2R2 415 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 PPP4R4Q6NUP7 873 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 C1orf94Q6P1W5 598 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 ZNF585AQ6P3V2 769 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 PM20D2Q8IYS1 436 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 C10orf53Q8N6V4 93 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 ST6GALNAC3Q8NDV1 305 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 OR10D3Q8NH80 312 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 BPIFA2Q96DR5 249 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 GPA33Q99795 319 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 RBM4BQ9BQ04 359 aaKnown RBP12.79□□□□□ -0.36
CLDN11-209ENST00000489485 RBM4Q9BWF3 364 aaKnown RBP12.79□□□□□ -0.36
CLDN11-209ENST00000489485 PRDM14Q9GZV8 571 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 GABARAPL1Q9H0R8 117 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 HDGFL3Q9Y3E1 203 aa12.79□□□□□ -0.36
CLDN11-209ENST00000489485 ARRDC5A6NEK1 342 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 ENO4A6NNW6 628 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 LRRN3E7EW58 273 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 PRRG2O14669 202 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 NPIPB7O75200 414 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 C1QL1O75973 258 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 ANXA8P13928 327 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 CBLP22681 906 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 IDUAP35475 653 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 DIO1P49895 249 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 CARD18P57730 90 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 PRKCDQ05655 676 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 BLMHQ13867 455 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 DAG1Q14118 895 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 FAHD1Q6P587 224 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 C5orf46Q6UWT4 87 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 TMPPEQ6ZT21 453 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 CD163Q86VB7 1156 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 CDK20Q8IZL9 346 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 OR2V1Q8NHB1 315 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 DNAJC9Q8WXX5 260 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 OSTF1Q92882 214 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 TAAR8Q969N4 342 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 SLC25A36Q96CQ1 311 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 POTEKPQ9BYX7 375 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 SLC19A3Q9BZV2 496 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 ZNF556Q9HAH1 456 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 KRCC1Q9NPI7 259 aaPredicted RBP12.78□□□□□ -0.36
CLDN11-209ENST00000489485 ZNF462Q96JM2 2506 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 TRAV36DV7A0A075B6V5 113 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 CDC42EP2O14613 210 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 OR2T1O43869 369 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 CXCL13O43927 109 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 CH25HO95992 272 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 SAGP10523 405 aaPredicted RBP12.78□□□□□ -0.36
CLDN11-209ENST00000489485 FUT1P19526 365 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 MAKP20794 623 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 OR7A5Q15622 319 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 FAM69AQ5T7M9 428 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 KDM4DQ6B0I6 523 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 GALNT5Q7Z7M9 940 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 FAM57AQ8TBR7 257 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 MIB2Q96AX9 1013 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 ZNF845Q96IR2 970 aaPredicted RBP12.78□□□□□ -0.36
CLDN11-209ENST00000489485 ADGRG7Q96K78 797 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 PSD2Q9BQI7 771 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 TAPBPLQ9BX59 468 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 VCX3BQ9H321 246 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 TIGARQ9NQ88 270 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 TMEFF2Q9UIK5 374 aaPredicted RBP12.78□□□□□ -0.36
CLDN11-209ENST00000489485 MGAT4BQ9UQ53 548 aa12.78□□□□□ -0.36
CLDN11-209ENST00000489485 KIAA1549Q9HCM3 1950 aa12.77□□□□□ -0.36
CLDN11-209ENST00000489485 POLEQ07864 2286 aa12.77□□□□□ -0.37
CLDN11-209ENST00000489485 MITFO75030 526 aaPredicted RBP12.77□□□□□ -0.37
CLDN11-209ENST00000489485 IMPDH2P12268 514 aa12.77□□□□□ -0.37
CLDN11-209ENST00000489485 IGFBP5P24593 272 aa12.77□□□□□ -0.37
CLDN11-209ENST00000489485 GTF2E2P29084 291 aaKnown RBP12.77□□□□□ -0.37
CLDN11-209ENST00000489485 CTBP2P56545 445 aa12.77□□□□□ -0.37
CLDN11-209ENST00000489485 OR2B6P58173 313 aa12.77□□□□□ -0.37
CLDN11-209ENST00000489485 CSNK2A1P68400 391 aaPredicted RBP12.77□□□□□ -0.37
CLDN11-209ENST00000489485 EMC4Q5J8M3 183 aa12.77□□□□□ -0.37
CLDN11-209ENST00000489485 LRRC17Q8N6Y2 441 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms