RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SLC25A36Q96CQ1 311 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 MUCL1Q96DR8 90 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 C18orf12Q96KH6 178 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 TAPBPLQ9BX59 468 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 C1QTNF6Q9BXI9 259 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 ZNF385DQ9H6B1 395 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 ARMC7Q9H6L4 198 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 NGBQ9NPG2 151 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 SLC7A10Q9NS82 523 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 UPB1Q9UBR1 384 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 SEC14L4Q9UDX3 406 aa12.34□□□□□ -0.43
VTI1A-206ENST00000489142 OR5H1A6NKK0 313 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 AQP7P3A6NL99 342 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 ABCD4O14678 606 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 CNOT4O95628 575 aaKnown RBP12.33□□□□□ -0.44
VTI1A-206ENST00000489142 INHBBP09529 407 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 CDH2P19022 906 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-206ENST00000489142 PPIBP23284 216 aaKnown RBP12.33□□□□□ -0.44
VTI1A-206ENST00000489142 CDKN1AP38936 164 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 RPS5P46782 204 aaKnown RBP12.33□□□□□ -0.44
VTI1A-206ENST00000489142 P2RY4P51582 365 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 MAP2K6P52564 334 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 MTPNP58546 118 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 EGR4Q05215 589 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 ADRM1Q16186 407 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 ZNF672Q499Z4 452 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-206ENST00000489142 REEP3Q6NUK4 255 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 DHDDSQ86SQ9 333 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 KDM8Q8N371 416 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 ZIC4Q8N9L1 334 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 RNF217Q8TC41 542 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 FBXW5Q969U6 566 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 KTI12Q96EK9 354 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-206ENST00000489142 WFDC6Q9BQY6 131 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 TRIM2Q9C040 744 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 TAS2R16Q9NYV7 291 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 RPS6KB2Q9UBS0 482 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 MALT1Q9UDY8 824 aa12.33□□□□□ -0.44
VTI1A-206ENST00000489142 MAGED1Q9Y5V3 778 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-206ENST00000489142 A0A1B0GWA3 101 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 ELOA3DA6NLF2 546 aaPredicted RBP12.32□□□□□ -0.44
VTI1A-206ENST00000489142 EVPLLA8MZ36 301 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 SHISA9B4DS77 424 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 M0R1B8 84 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 PDLIM1O00151 329 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 NPIPB7O75200 414 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 AHSA1O95433 338 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 ETS2P15036 469 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 FOSL1P15407 271 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 GPX2P18283 190 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 CBLP22681 906 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 SLC6A2P23975 617 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 PRKAR1BP31321 381 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 CDH11P55287 796 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 ATP5J2P56134 94 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 SLC25A3Q00325 362 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 DMTNQ08495 405 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 GABRA6Q16445 453 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 ZSWIM7Q19AV6 140 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 ELOA3BQ3SY89 546 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 RUNDC3AQ59EK9 446 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 TMEM225Q6GV28 225 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 AAED1Q7RTV5 226 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 KRT73Q86Y46 540 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 SMYD1Q8NB12 490 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 ELOA3Q8NG57 546 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 SMAP2Q8WU79 429 aaPredicted RBP12.32□□□□□ -0.44
VTI1A-206ENST00000489142 PTDSS2Q9BVG9 487 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 TMEM120AQ9BXJ8 343 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 GSX2Q9BZM3 304 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 RABEP2Q9H5N1 569 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 CXorf56Q9H5V9 222 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 LEF1Q9UJU2 399 aaPredicted RBP12.32□□□□□ -0.44
VTI1A-206ENST00000489142 SLC25A15Q9Y619 301 aa12.32□□□□□ -0.44
VTI1A-206ENST00000489142 HEATR1Q9H583 2144 aaKnown RBP12.31□□□□□ -0.44
VTI1A-206ENST00000489142 FTCDNL1E5RQL4 147 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 ANGPT2O15123 496 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 OPN1SWP03999 348 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 DANCRP0C864 163 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 PNMTP11086 282 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 SELENOPP49908 381 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 RPS4XP62701 263 aaKnown RBP12.31□□□□□ -0.44
VTI1A-206ENST00000489142 NFYCQ13952 458 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 CYP51A1Q16850 503 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 PGGHGQ32M88 737 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 DHRS4L2Q6PKH6 230 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 PTOV1Q86YD1 416 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 WDR31Q8NA23 367 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 TMEM45BQ96B21 275 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 USB1Q9BQ65 265 aaKnown RBP12.31□□□□□ -0.44
VTI1A-206ENST00000489142 SF3B5Q9BWJ5 86 aaKnown RBP12.31□□□□□ -0.44
VTI1A-206ENST00000489142 SLCO5A1Q9H2Y9 848 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 PIF1Q9H611 641 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 TMEM38AQ9H6F2 299 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 PARPBPQ9NWS1 579 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 ZNF446Q9NWS9 450 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 CISD1Q9NZ45 108 aaKnown RBP12.31□□□□□ -0.44
VTI1A-206ENST00000489142 TRIM33Q9UPN9 1127 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 CORO2BQ9UQ03 480 aa12.31□□□□□ -0.44
VTI1A-206ENST00000489142 NDUFAF1Q9Y375 327 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms