RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 IGFBPL1Q8WX77 278 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 TMEM45BQ96B21 275 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 C3orf49Q96BT1 292 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 BDH2Q9BUT1 245 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 TMEM38AQ9H6F2 299 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 C12orf10Q9HB07 376 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 VAPAQ9P0L0 249 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 RPS6KB2Q9UBS0 482 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 LEF1Q9UJU2 399 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 DCTN4Q9UJW0 460 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 CHST2Q9Y4C5 530 aa12.18□□□□□ -0.46
SPTLC1-207ENST00000488921 TRBV5-3A0A0A0MS03 114 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 PRORSD1PA6NEY8 169 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 TMEM229AB2RXF0 380 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 ANGPT2O15123 496 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 AKR7A3O95154 331 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 AHSA1O95433 338 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 INHBBP09529 407 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 SLC6A2P23975 617 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 GTF2E2P29084 291 aaKnown RBP12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 TGFBR3Q03167 851 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 ZNF672Q499Z4 452 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 C1orf140Q5VVS0 124 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 TMEM225Q6GV28 225 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 C5orf46Q6UWT4 87 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 TMEM108Q6UXF1 575 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 ABHD12BQ7Z5M8 362 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 ATG4DQ86TL0 474 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 GPAT4Q86UL3 456 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 C17orf78Q8N4C9 275 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 TMEM99Q8N816 258 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 C1orf162Q8NEQ5 155 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 OR9K2Q8NGE7 335 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 RADILQ96JH8 1075 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 Q96MF0 132 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 ZNF607Q96SK3 696 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 EVA1AQ9H8M9 152 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 SLC52A3Q9NQ40 469 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 ZNF701Q9NV72 531 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 FGFR1OP2Q9NVK5 253 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 FAIMQ9NVQ4 179 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 ADPRHL2Q9NX46 363 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 SLAMF8Q9P0V8 285 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 SLC13A4Q9UKG4 626 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 MGAT4BQ9UQ53 548 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 LAMP3Q9UQV4 416 aa12.17□□□□□ -0.46
SPTLC1-207ENST00000488921 ELOA3DA6NLF2 546 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 NPIPB7O75200 414 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 SERPINB7O75635 380 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 GPX2P18283 190 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 BNIP2Q12982 314 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 SCARB2Q14108 478 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 ELOA3BQ3SY89 546 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 DHRS4L2Q6PKH6 230 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 C6orf89Q6UWU4 347 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 DHDDSQ86SQ9 333 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 LSMEM1Q8N8F7 131 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 POMGNT2Q8NAT1 580 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 HIPK4Q8NE63 616 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 KBTBD8Q8NFY9 601 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 ELOA3Q8NG57 546 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 MFSD8Q8NHS3 518 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 TSPEARQ8WU66 669 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 TRMT61AQ96FX7 289 aaKnown RBP12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 TRIM2Q9C040 744 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 SLCO5A1Q9H2Y9 848 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 ALG2Q9H553 416 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 NPHS2Q9NP85 383 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 MRGBPQ9NV56 204 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 TESQ9UGI8 421 aaKnown RBP12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 ANGPT4Q9Y264 503 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 RASD1Q9Y272 281 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 AMDHD2Q9Y303 409 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 NDUFAF1Q9Y375 327 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 MAGED1Q9Y5V3 778 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 ROS1P08922 2347 aa12.16□□□□□ -0.46
SPTLC1-207ENST00000488921 ACANP16112 2415 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 DPRXA6NFQ7 191 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 OR6C65A6NJZ3 312 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 PDLIM1O00151 329 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 ABCD4O14678 606 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 ITGA5P08648 1049 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 PNMTP11086 282 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 PTAFRP25105 342 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 MPGP29372 298 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 NTF4P34130 210 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 SEC24CP53992 1094 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 CDH11P55287 796 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 ATP5J2P56134 94 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 ETFDHQ16134 617 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 GABRA6Q16445 453 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 TSPO2Q5TGU0 170 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 FAM91A1Q658Y4 838 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 KLHL24Q6TFL4 600 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 AAED1Q7RTV5 226 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 DPP10Q8N608 796 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 OR52E4Q8NGH9 312 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 OR52N5Q8NH56 324 aa12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 LILRB1Q8NHL6 650 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-207ENST00000488921 SMAP2Q8WU79 429 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms