RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 COL6A5A8TX70 2615 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 A0A096LNT2 108 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 TRPC5OSA6NMA1 111 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 HDAC3O15379 428 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 SLC22A3O75751 556 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 WNT11O96014 354 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 IL6P05231 212 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 SLC25A16P16260 332 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 CDH2P19022 906 aaPredicted RBP13.4□□□□□ -0.26
TRIM50-203ENST00000488217 EPHA3P29320 983 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 COPZ1P61923 177 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 OR7A5Q15622 319 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 ZSWIM7Q19AV6 140 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 WBP2NLQ6ICG8 309 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 LSRQ86X29 649 aaPredicted RBP13.4□□□□□ -0.26
TRIM50-203ENST00000488217 VRK2Q86Y07 508 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 ZNF525Q8N782 197 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 FAM168AQ92567 244 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 PROX1Q92786 737 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 ZBTB9Q96C00 473 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 ZNF385AQ96PM9 386 aaKnown RBP13.4□□□□□ -0.26
TRIM50-203ENST00000488217 TMEM45AQ9NWC5 275 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 CALML5Q9NZT1 146 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 CUBNO60494 3623 aa13.4□□□□□ -0.26
TRIM50-203ENST00000488217 ATRQ13535 2644 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 AQP7P3A6NL99 342 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 RNF212BA8MTL3 300 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 A8MVM7 634 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 KLF11O14901 512 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 KRT33AO76009 404 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 VAMP5O95183 116 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 H2AFXP16104 143 aaPredicted RBP13.39□□□□□ -0.27
TRIM50-203ENST00000488217 CRATP43155 626 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 MVDP53602 400 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 VLDLRP98155 873 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 SLC25A3Q00325 362 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 BNIP2Q12982 314 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 SWI5Q1ZZU3 235 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 MST1LQ2TV78 715 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 CYB5R2Q6BCY4 276 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 CREB3L2Q70SY1 520 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 CROCCP2Q86T23 111 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 GPAT4Q86UL3 456 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 CLIP4Q8N3C7 705 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 CADM2Q8N3J6 435 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 C10orf105Q8TEF2 133 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 SLC38A5Q8WUX1 472 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 NANOS1Q8WY41 292 aaKnown RBP13.39□□□□□ -0.27
TRIM50-203ENST00000488217 KCNK17Q96T54 332 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 TAPBPLQ9BX59 468 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 MOKQ9UQ07 419 aa13.39□□□□□ -0.27
TRIM50-203ENST00000488217 ALPK2Q86TB3 2170 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 A0A0G2JPF8 293 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 HNRNPCL2B2RXH8 293 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 HNRNPCL3B7ZW38 293 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 SLCO1B7G3V0H7 640 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 HNRNPCL1O60812 293 aaKnown RBP13.38□□□□□ -0.27
TRIM50-203ENST00000488217 ZCCHC18P0CG32 403 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 HNRNPCL4P0DMR1 293 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 IDO1P14902 403 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 PAX7P23759 505 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 CRISP3P54108 245 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 WDR4P57081 412 aaKnown RBP13.38□□□□□ -0.27
TRIM50-203ENST00000488217 LARS2Q15031 903 aaKnown RBP13.38□□□□□ -0.27
TRIM50-203ENST00000488217 LIN52Q52LA3 116 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 HIKESHIQ53FT3 197 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 C6orf52Q5T4I8 152 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 NXNQ6DKJ4 435 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 KLHL24Q6TFL4 600 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 ZNF836Q6ZNA1 936 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 ABHD12BQ7Z5M8 362 aaPredicted RBP13.38□□□□□ -0.27
TRIM50-203ENST00000488217 ANKRD42Q8N9B4 389 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 TPT1P8Q9HAU6 139 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 OBP2BQ9NPH6 170 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 SLC6A13Q9NSD5 602 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 ARGLU1Q9NWB6 273 aaPredicted RBP13.38□□□□□ -0.27
TRIM50-203ENST00000488217 ADPRHL2Q9NX46 363 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 P2RX2Q9UBL9 471 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 CDC42EP3Q9UKI2 254 aa13.38□□□□□ -0.27
TRIM50-203ENST00000488217 SNNO75324 88 aaPredicted RBP13.37□□□□□ -0.27
TRIM50-203ENST00000488217 ANP32DO95626 131 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 CSF3P09919 207 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 FAM157CP0CG43 387 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 KITP10721 976 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 PRG2P13727 222 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 ETFAP13804 333 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 NCF2P19878 526 aaPredicted RBP13.37□□□□□ -0.27
TRIM50-203ENST00000488217 USF1P22415 310 aaPredicted RBP13.37□□□□□ -0.27
TRIM50-203ENST00000488217 SERPINF1P36955 418 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 P2RY4P51582 365 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 LSM11P83369 360 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRIM50-203ENST00000488217 PDCD4Q53EL6 469 aaKnown RBP13.37□□□□□ -0.27
TRIM50-203ENST00000488217 C1orf140Q5VVS0 124 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 ANKRD16Q6P6B7 361 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 EPHX4Q8IUS5 362 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 TMEM158Q8WZ71 300 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 BCL2L2Q92843 193 aaPredicted RBP13.37□□□□□ -0.27
TRIM50-203ENST00000488217 FBXO17Q96EF6 278 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 ITCHQ96J02 903 aa13.37□□□□□ -0.27
TRIM50-203ENST00000488217 REPIN1Q9BWE0 567 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms