RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 TRIM2Q9C040 744 aa20.94■□□□□ 0.94
RNF38-208ENST00000488058 KAT8Q9H7Z6 458 aaKnown RBP20.94■□□□□ 0.94
RNF38-208ENST00000488058 SAR1AQ9NR31 198 aa20.94■□□□□ 0.94
RNF38-208ENST00000488058 BEX4Q9NWD9 120 aaPredicted RBP20.94■□□□□ 0.94
RNF38-208ENST00000488058 PARPBPQ9NWS1 579 aa20.94■□□□□ 0.94
RNF38-208ENST00000488058 ASB6Q9NWX5 421 aa20.94■□□□□ 0.94
RNF38-208ENST00000488058 SELENONQ9NZV5 590 aa20.94■□□□□ 0.94
RNF38-208ENST00000488058 F8P00451 2351 aa20.94■□□□□ 0.94
RNF38-208ENST00000488058 PRR14LQ5THK1 2151 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 MRASO14807 208 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 CLOCKO15516 846 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 NPIPB7O75200 414 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 MFN2O95140 757 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 MDH1P40925 334 aaKnown RBP20.93■□□□□ 0.94
RNF38-208ENST00000488058 PPA1Q15181 289 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 MAPRE2Q15555 327 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 C9orf135Q5VTT2 229 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 REP15Q6BDI9 236 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 AAED1Q7RTV5 226 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 SNX32Q86XE0 403 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 ZNF433Q8N7K0 673 aaPredicted RBP20.93■□□□□ 0.94
RNF38-208ENST00000488058 LSMEM1Q8N8F7 131 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 MUCL1Q96DR8 90 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 KTI12Q96EK9 354 aaPredicted RBP20.93■□□□□ 0.94
RNF38-208ENST00000488058 SF3B5Q9BWJ5 86 aaKnown RBP20.93■□□□□ 0.94
RNF38-208ENST00000488058 CCDC134Q9H6E4 229 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 TMEM27Q9HBJ8 222 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 KLHL14Q9P2G3 628 aa20.93■□□□□ 0.94
RNF38-208ENST00000488058 LOC100653049A0A140TA62 436 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 M0QX08 132 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 M0R3H8 397 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 KRT34O76011 436 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 PCBP3P57721 371 aaKnown RBP20.92■□□□□ 0.94
RNF38-208ENST00000488058 EGR4Q05215 589 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 NANOGP8Q6NSW7 305 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 C6orf89Q6UWU4 347 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 C20orf204Q6ZNR8 217 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 NET1Q7Z628 596 aaPredicted RBP20.92■□□□□ 0.94
RNF38-208ENST00000488058 RANBP3LQ86VV4 465 aaPredicted RBP20.92■□□□□ 0.94
RNF38-208ENST00000488058 TGIF2LYQ8IUE0 185 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 P3H2Q8IVL5 708 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 MFSD8Q8NHS3 518 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 SLC26A7Q8TE54 656 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 DNAJA4Q8WW22 397 aaPredicted RBP20.92■□□□□ 0.94
RNF38-208ENST00000488058 PIGTQ969N2 578 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 ZNF385AQ96PM9 386 aaKnown RBP20.92■□□□□ 0.94
RNF38-208ENST00000488058 WFDC6Q9BQY6 131 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 ESRP2Q9H6T0 727 aaKnown RBP20.92■□□□□ 0.94
RNF38-208ENST00000488058 NANOGQ9H9S0 305 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 C12orf10Q9HB07 376 aa20.92■□□□□ 0.94
RNF38-208ENST00000488058 RAI1Q7Z5J4 1906 aaPredicted RBP20.92■□□□□ 0.94
RNF38-208ENST00000488058 SMPD2O60906 423 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 CD3EP07766 207 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 PNMTP11086 282 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 PTNP21246 168 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 PCGF2P35227 344 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 FOXG1P55316 489 aaPredicted RBP20.91■□□□□ 0.94
RNF38-208ENST00000488058 OR1Q1Q15612 314 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 RABL3Q5HYI8 236 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 TIMM23BQ5SRD1 257 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 NCMAPQ5T1S8 102 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 TSPO2Q5TGU0 170 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 ULK3Q6PHR2 472 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 MED13LQ71F56 2210 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 SLC30A8Q8IWU4 369 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 SLC38A4Q969I6 547 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 LRRC58Q96CX6 371 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 SLC47A1Q96FL8 570 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 PTDSS2Q9BVG9 487 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 SLC7A10Q9NS82 523 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 TAS2R16Q9NYV7 291 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 MALT1Q9UDY8 824 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 RNF115Q9Y4L5 304 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 CAPN7Q9Y6W3 813 aa20.91■□□□□ 0.94
RNF38-208ENST00000488058 DSCAMO60469 2012 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 A0A1W2PR80 420 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 OR5H1A6NKK0 313 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 BBIP1A8MTZ0 92 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 CD99P14209 185 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 CBLP22681 906 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 VMACQ2NL98 169 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 INTS11Q5TA45 600 aaKnown RBP20.9■□□□□ 0.94
RNF38-208ENST00000488058 PATL1Q86TB9 770 aaKnown RBP20.9■□□□□ 0.94
RNF38-208ENST00000488058 OR52N5Q8NH56 324 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 VANGL1Q8TAA9 524 aaPredicted RBP20.9■□□□□ 0.94
RNF38-208ENST00000488058 AKAP1Q92667 903 aaKnown RBP eCLIP20.9■□□□□ 0.94
RNF38-208ENST00000488058 TMEM45BQ96B21 275 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 MCHR1Q99705 422 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 SH3GL1Q99961 368 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 ECSITQ9BQ95 431 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 TMEM204Q9BSN7 226 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 RASD1Q9Y272 281 aa20.9■□□□□ 0.94
RNF38-208ENST00000488058 FTCDNL1E5RQL4 147 aa20.89■□□□□ 0.93
RNF38-208ENST00000488058 KRT33AO76009 404 aa20.89■□□□□ 0.93
RNF38-208ENST00000488058 VAMP5O95183 116 aa20.89■□□□□ 0.93
RNF38-208ENST00000488058 ITGA5P08648 1049 aa20.89■□□□□ 0.93
RNF38-208ENST00000488058 P2RY4P51582 365 aa20.89■□□□□ 0.93
RNF38-208ENST00000488058 ADAM8P78325 824 aa20.89■□□□□ 0.93
RNF38-208ENST00000488058 NKX6-1P78426 367 aaPredicted RBP20.89■□□□□ 0.93
RNF38-208ENST00000488058 IL1RL1Q01638 556 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms