RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 CXorf67Q86X51 503 aaPredicted RBP6.35□□□□□ -1.39
UBE4B-209ENST00000487244 P3H2Q8IVL5 708 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 SMYD1Q8NB12 490 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 C11orf65Q8NCR3 313 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 HIPK4Q8NE63 616 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 GPR32P1Q8NGA4 272 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 UTP4Q969X6 686 aaKnown RBP6.35□□□□□ -1.39
UBE4B-209ENST00000487244 TAMM41Q96BW9 452 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 LRRC58Q96CX6 371 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 RCN3Q96D15 328 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 ZC3HAV1LQ96H79 300 aaKnown RBP6.35□□□□□ -1.39
UBE4B-209ENST00000487244 ELAC2Q9BQ52 826 aaKnown RBP6.35□□□□□ -1.39
UBE4B-209ENST00000487244 POLDIP3Q9BY77 421 aaKnown RBP6.35□□□□□ -1.39
UBE4B-209ENST00000487244 KLHL4Q9C0H6 718 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 NANOGQ9H9S0 305 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 BCO1Q9HAY6 547 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 CACYBPQ9HB71 228 aaKnown RBP6.35□□□□□ -1.39
UBE4B-209ENST00000487244 GLRX2Q9NS18 164 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 RASSF1Q9NS23 344 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 ELOVL5Q9NYP7 299 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 C6orf203Q9P0P8 240 aaPredicted RBP6.35□□□□□ -1.39
UBE4B-209ENST00000487244 PRSS50Q9UI38 385 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 ANGPT4Q9Y264 503 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 IFT52Q9Y366 437 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 HDGFL3Q9Y3E1 203 aa6.35□□□□□ -1.39
UBE4B-209ENST00000487244 SPIN1Q9Y657 262 aaPredicted RBP6.35□□□□□ -1.39
UBE4B-209ENST00000487244 PRRC2AP48634 2157 aaKnown RBP6.35□□□□□ -1.39
UBE4B-209ENST00000487244 PLCE1Q9P212 2302 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 DSCAMO60469 2012 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 IGKV1D-42A0A075B6H8 117 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 IGKV3D-15A0A087WSY6 115 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 A0A1B0GWA3 101 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 MEGF11A6BM72 1044 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 LIPT2A6NK58 231 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 CCT8L1PA6NM43 557 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 BBIP1A8MTZ0 92 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 DEFB108AA8MXU0 73 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 C16orf97H3BN30 126 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 M0QX08 132 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 ZNF208O43345 1280 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 NPIPB7O75200 414 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 AKR7A3O95154 331 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 IGHV3-9P01782 118 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 HRGP04196 525 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 THBDP07204 575 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 CD247P20963 164 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 FPR1P21462 350 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 DRD4P21917 467 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 CXCR1P25024 350 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 LSP1P33241 339 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 PEX19P40855 299 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 COPZ1P61923 177 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 CSNK2A1P68400 391 aaPredicted RBP6.34□□□□□ -1.39
UBE4B-209ENST00000487244 H3F3AP84243 136 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 EGR4Q05215 589 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 CEACAM7Q14002 265 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 CYLC2Q14093 348 aaPredicted RBP6.34□□□□□ -1.39
UBE4B-209ENST00000487244 OR7A5Q15622 319 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 NPTX1Q15818 432 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 DUSP7Q16829 419 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 MMEL1Q495T6 779 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 COQ5Q5HYK3 327 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 TMEM201Q5SNT2 666 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 GTF2IRD2BQ6EKJ0 949 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 SPATA21Q7Z572 469 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 GTF2IRD2Q86UP8 949 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 CALHM3Q86XJ0 350 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 CDC20BQ86Y33 519 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 KRT73Q86Y46 540 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 RBM45Q8IUH3 476 aaKnown RBP6.34□□□□□ -1.39
UBE4B-209ENST00000487244 ARMC8Q8IUR7 673 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 GABRG1Q8N1C3 465 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 SLC43A2Q8N370 569 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 TMEM99Q8N816 258 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 OR4D11Q8NGI4 311 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 DDIT4LQ96D03 193 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 KTI12Q96EK9 354 aaPredicted RBP6.34□□□□□ -1.39
UBE4B-209ENST00000487244 DACH2Q96NX9 599 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 ZNF607Q96SK3 696 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 MED18Q9BUE0 208 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 PTDSS2Q9BVG9 487 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 ADPRHL2Q9NX46 363 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 TMEM181Q9P2C4 612 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 KLHL9Q9P2J3 617 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 SEC14L4Q9UDX3 406 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 ARID1AO14497 2285 aa6.34□□□□□ -1.39
UBE4B-209ENST00000487244 ACANP16112 2415 aa6.34□□□□□ -1.4
UBE4B-209ENST00000487244 FLNAP21333 2647 aaKnown RBP6.33□□□□□ -1.4
UBE4B-209ENST00000487244 MED13LQ71F56 2210 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 LOC100289279A0A1B0GTE1 492 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 PRORSD1PA6NEY8 169 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 ZNF724A8MTY0 619 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 A8MVM7 634 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 FTCDNL1E5RQL4 147 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 SERPINB7O75635 380 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 ADAP00813 363 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 TNFRSF1BP20333 461 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 LOXP28300 417 aaPredicted RBP6.33□□□□□ -1.4
UBE4B-209ENST00000487244 DNAJA1P31689 397 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms