RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 ACBD4Q8NC06 268 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 ADPRHL1Q8NDY3 354 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 SLC41A3Q96GZ6 507 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 NSMCE2Q96MF7 247 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 HS6ST2Q96MM7 605 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 USB1Q9BQ65 265 aaKnown RBP13.05□□□□□ -0.32
LIMS3-205ENST00000487150 ASPNQ9BXN1 380 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 NPDC1Q9NQX5 325 aaPredicted RBP13.05□□□□□ -0.32
LIMS3-205ENST00000487150 PLSCR4Q9NRQ2 329 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 PARPBPQ9NWS1 579 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 SLC7A7Q9UM01 511 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 B3GALT5Q9Y2C3 310 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 MED12Q93074 2177 aa13.05□□□□□ -0.32
LIMS3-205ENST00000487150 IGHV3-15A0A0B4J1V0 119 aa13.04□□□□□ -0.32
LIMS3-205ENST00000487150 AKAP8O43823 692 aaKnown RBP13.04□□□□□ -0.32
LIMS3-205ENST00000487150 IGF2P01344 180 aa13.04□□□□□ -0.32
LIMS3-205ENST00000487150 IMPDH2P12268 514 aa13.04□□□□□ -0.32
LIMS3-205ENST00000487150 ITGA2P17301 1181 aa13.04□□□□□ -0.32
LIMS3-205ENST00000487150 TCN1P20061 433 aaPredicted RBP13.04□□□□□ -0.32
LIMS3-205ENST00000487150 RPS5P46782 204 aaKnown RBP13.04□□□□□ -0.32
LIMS3-205ENST00000487150 DMRTC2Q8IXT2 367 aaPredicted RBP13.04□□□□□ -0.32
LIMS3-205ENST00000487150 SCAIQ8N9R8 606 aa13.04□□□□□ -0.32
LIMS3-205ENST00000487150 MCUR1Q96AQ8 359 aa13.04□□□□□ -0.32
LIMS3-205ENST00000487150 HSH2DQ96JZ2 352 aa13.04□□□□□ -0.32
LIMS3-205ENST00000487150 RSPO3Q9BXY4 272 aaPredicted RBP13.04□□□□□ -0.32
LIMS3-205ENST00000487150 TRIM15Q9C019 465 aa13.04□□□□□ -0.32
LIMS3-205ENST00000487150 DCAF13Q9NV06 445 aaKnown RBP13.04□□□□□ -0.32
LIMS3-205ENST00000487150 GALNT8Q9NY28 637 aa13.04□□□□□ -0.32
LIMS3-205ENST00000487150 KCNN3Q9UGI6 736 aa13.04□□□□□ -0.32
LIMS3-205ENST00000487150 CD300AQ9UGN4 299 aa13.04□□□□□ -0.32
LIMS3-205ENST00000487150 EGFL7Q9UHF1 273 aa13.04□□□□□ -0.32
LIMS3-205ENST00000487150 CLEC4AQ9UMR7 237 aa13.04□□□□□ -0.32
LIMS3-205ENST00000487150 NOSIPQ9Y314 301 aaKnown RBP13.04□□□□□ -0.32
LIMS3-205ENST00000487150 FAM32AQ9Y421 112 aaKnown RBP13.04□□□□□ -0.32
LIMS3-205ENST00000487150 FREM3P0C091 2139 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 OR6C65A6NJZ3 312 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 ARPC2O15144 300 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 TPST2O60704 377 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 ATP5HO75947 161 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 CGAP01215 116 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 POU2F1P14859 743 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 PPP3CBP16298 524 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 HOXB6P17509 224 aaKnown RBP13.03□□□□□ -0.32
LIMS3-205ENST00000487150 GRNP28799 593 aaKnown RBP13.03□□□□□ -0.32
LIMS3-205ENST00000487150 CD79BP40259 229 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 EGR4Q05215 589 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 POU4F3Q15319 338 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 TMEM225Q6GV28 225 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 SSX8Q7RTT4 187 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 GDF7Q7Z4P5 450 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 TUSC5Q8IXB3 177 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 OFCC1Q8IZS5 231 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 C10orf53Q8N6V4 93 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 RNF148Q8N7C7 305 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 OR4D11Q8NGI4 311 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 KTI12Q96EK9 354 aaPredicted RBP13.03□□□□□ -0.32
LIMS3-205ENST00000487150 ZNF426Q9BUY5 554 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 PTDSS2Q9BVG9 487 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 OR10A4Q9H209 315 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 ANKRD19PQ9H560 264 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 ACTR3BQ9P1U1 418 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 NDRG3Q9UGV2 375 aa13.03□□□□□ -0.32
LIMS3-205ENST00000487150 ASH1LQ9NR48 2969 aaKnown RBP13.02□□□□□ -0.32
LIMS3-205ENST00000487150 IGKV1D-42A0A075B6H8 117 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 TUBAL3A6NHL2 446 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF716A6NP11 495 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 FTCDNL1E5RQL4 147 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 C16orf97H3BN30 126 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 GYG2O15488 501 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 MRPL33O75394 65 aaKnown RBP13.02□□□□□ -0.33
LIMS3-205ENST00000487150 AKR7A3O95154 331 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 NQO1P15559 274 aaKnown RBP13.02□□□□□ -0.33
LIMS3-205ENST00000487150 NCK1P16333 377 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 SSTR2P30874 369 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 KIR2DL3P43628 341 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 OR1E2P47887 323 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 OR3A2P47893 321 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 SLC17A1Q14916 467 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 P2RY6Q15077 328 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 TFAP2EQ6VUC0 442 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 H1FNTQ75WM6 255 aaPredicted RBP13.02□□□□□ -0.33
LIMS3-205ENST00000487150 ABHD12BQ7Z5M8 362 aaPredicted RBP13.02□□□□□ -0.33
LIMS3-205ENST00000487150 VTCN1Q7Z7D3 282 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 GPAT4Q86UL3 456 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 RBM45Q8IUH3 476 aaKnown RBP13.02□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF100Q8IYN0 542 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 FAM222BQ8WU58 562 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 MARVELD3Q96A59 401 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 TMEM45BQ96B21 275 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 APH1AQ96BI3 265 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 SLC25A36Q96CQ1 311 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 C14orf79Q96F83 325 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 WFDC6Q9BQY6 131 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 FNDC11Q9BVV2 318 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 HDHD5Q9BXW7 423 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 OPN3Q9H1Y3 402 aaPredicted RBP13.02□□□□□ -0.33
LIMS3-205ENST00000487150 FKRPQ9H9S5 495 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 KRCC1Q9NPI7 259 aaPredicted RBP13.02□□□□□ -0.33
LIMS3-205ENST00000487150 RIMS3Q9UJD0 308 aa13.02□□□□□ -0.33
LIMS3-205ENST00000487150 HEATR5AQ86XA9 2040 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms