RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 C1orf162Q8NEQ5 155 aaPredicted RBP16.8■□□□□ 0.28
CLIP2-206ENST00000487091 STK35Q8TDR2 534 aa16.8■□□□□ 0.28
CLIP2-206ENST00000487091 C3orf49Q96BT1 292 aa16.8■□□□□ 0.28
CLIP2-206ENST00000487091 TRMT61AQ96FX7 289 aaKnown RBP16.8■□□□□ 0.28
CLIP2-206ENST00000487091 AMBRA1Q9C0C7 1298 aa16.8■□□□□ 0.28
CLIP2-206ENST00000487091 SLC7A10Q9NS82 523 aa16.8■□□□□ 0.28
CLIP2-206ENST00000487091 NPAP1Q9NZP6 1156 aa16.8■□□□□ 0.28
CLIP2-206ENST00000487091 SLAMF8Q9P0V8 285 aa16.8■□□□□ 0.28
CLIP2-206ENST00000487091 MGAT4BQ9UQ53 548 aa16.8■□□□□ 0.28
CLIP2-206ENST00000487091 PLCE1Q9P212 2302 aa16.8■□□□□ 0.28
CLIP2-206ENST00000487091 TRBV5-3A0A0A0MS03 114 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 A0A1W2PP18 115 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 TMEM229AB2RXF0 380 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 SHISA9B4DS77 424 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 VAMP5O95183 116 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 HEXAP06865 529 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 PRKAR1BP31321 381 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 FOXG1P55316 489 aaPredicted RBP16.79■□□□□ 0.28
CLIP2-206ENST00000487091 LTBQ06643 244 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 SQLEQ14534 574 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 PGGHGQ32M88 737 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 AGKQ53H12 422 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 PAGE3Q5JUK9 113 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 GCNT6Q5T4J0 391 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 C1orf140Q5VVS0 124 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 TMEM225Q6GV28 225 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 TMEM108Q6UXF1 575 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 ZIC4Q8N9L1 334 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 OR9K2Q8NGE7 335 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 OR52E4Q8NGH9 312 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 OR52N5Q8NH56 324 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 CKAP2Q8WWK9 683 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 GRIP2Q9C0E4 1043 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 RABEP2Q9H5N1 569 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 VIPAS39Q9H9C1 493 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 CISD1Q9NZ45 108 aaKnown RBP16.79■□□□□ 0.28
CLIP2-206ENST00000487091 VAPAQ9P0L0 249 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 CORO2BQ9UQ03 480 aa16.79■□□□□ 0.28
CLIP2-206ENST00000487091 HEATR1Q9H583 2144 aaKnown RBP16.78■□□□□ 0.28
CLIP2-206ENST00000487091 TRIM64A6NGJ6 449 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 TRIM64BA6NI03 449 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 ABCD4O14678 606 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 FRS3O43559 492 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 GPX2P18283 190 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 PTAFRP25105 342 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 P2RY4P51582 365 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 CDK6Q00534 326 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 TGFBR3Q03167 851 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 ETFDHQ16134 617 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 TSPO2Q5TGU0 170 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 REEP3Q6NUK4 255 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 KLHL17Q6TDP4 642 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 AAED1Q7RTV5 226 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 LSRQ86X29 649 aaPredicted RBP16.78■□□□□ 0.28
CLIP2-206ENST00000487091 KRT73Q86Y46 540 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 C17orf78Q8N4C9 275 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 POMGNT2Q8NAT1 580 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 MFSD8Q8NHS3 518 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 NFKBIDQ8NI38 313 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 MAGEB18Q96M61 343 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 SPATA5L1Q9BVQ7 753 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 C12orf10Q9HB07 376 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 ADPRHL2Q9NX46 363 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 CSPG4Q6UVK1 2322 aa16.78■□□□□ 0.28
CLIP2-206ENST00000487091 NSD1Q96L73 2696 aaPredicted RBP16.77■□□□□ 0.28
CLIP2-206ENST00000487091 EVPLLA8MZ36 301 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 LY6G6DO95868 133 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 MPGP29372 298 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 DHRS4L2Q6PKH6 230 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 C6orf89Q6UWU4 347 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 GPAT4Q86UL3 456 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 DTX2Q86UW9 622 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 LSMEM1Q8N8F7 131 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 WDR31Q8NA23 367 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 GTPBP3Q969Y2 492 aaKnown RBP16.77■□□□□ 0.28
CLIP2-206ENST00000487091 BOD1Q96IK1 185 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 ZNF385AQ96PM9 386 aaKnown RBP16.77■□□□□ 0.28
CLIP2-206ENST00000487091 RSPO3Q9BXY4 272 aaPredicted RBP16.77■□□□□ 0.28
CLIP2-206ENST00000487091 SLCO5A1Q9H2Y9 848 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 TMEM38AQ9H6F2 299 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 FAIMQ9NVQ4 179 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 ARGLU1Q9NWB6 273 aaPredicted RBP16.77■□□□□ 0.28
CLIP2-206ENST00000487091 RASD1Q9Y272 281 aa16.77■□□□□ 0.28
CLIP2-206ENST00000487091 MAGED1Q9Y5V3 778 aaPredicted RBP16.77■□□□□ 0.28
CLIP2-206ENST00000487091 AHSA1O95433 338 aa16.76■□□□□ 0.27
CLIP2-206ENST00000487091 CD40P25942 277 aa16.76■□□□□ 0.27
CLIP2-206ENST00000487091 ZNF83P51522 516 aa16.76■□□□□ 0.27
CLIP2-206ENST00000487091 CDH11P55287 796 aa16.76■□□□□ 0.27
CLIP2-206ENST00000487091 HOXC5Q00444 222 aa16.76■□□□□ 0.27
CLIP2-206ENST00000487091 DLEU7Q6UYE1 221 aa16.76■□□□□ 0.27
CLIP2-206ENST00000487091 CREB3L2Q70SY1 520 aa16.76■□□□□ 0.27
CLIP2-206ENST00000487091 Q71RC1 249 aaPredicted RBP16.76■□□□□ 0.27
CLIP2-206ENST00000487091 ABHD12BQ7Z5M8 362 aaPredicted RBP16.76■□□□□ 0.27
CLIP2-206ENST00000487091 C10orf111Q8N326 155 aa16.76■□□□□ 0.27
CLIP2-206ENST00000487091 TRAF4Q9BUZ4 470 aaPredicted RBP16.76■□□□□ 0.27
CLIP2-206ENST00000487091 SLC17A5Q9NRA2 495 aa16.76■□□□□ 0.27
CLIP2-206ENST00000487091 RPS6KB2Q9UBS0 482 aa16.76■□□□□ 0.27
CLIP2-206ENST00000487091 AMDHD2Q9Y303 409 aa16.76■□□□□ 0.27
CLIP2-206ENST00000487091 TLN2Q9Y4G6 2542 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 OR6C65A6NJZ3 312 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms