RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 OR4D11Q8NGI4 311 aa16.15■□□□□ 0.18
COL1A1-207ENST00000486572 MFSD8Q8NHS3 518 aa16.15■□□□□ 0.18
COL1A1-207ENST00000486572 KTI12Q96EK9 354 aaPredicted RBP16.15■□□□□ 0.18
COL1A1-207ENST00000486572 CCT8L2Q96SF2 557 aa16.15■□□□□ 0.18
COL1A1-207ENST00000486572 MED18Q9BUE0 208 aa16.15■□□□□ 0.18
COL1A1-207ENST00000486572 PTDSS2Q9BVG9 487 aa16.15■□□□□ 0.18
COL1A1-207ENST00000486572 ALG2Q9H553 416 aa16.15■□□□□ 0.18
COL1A1-207ENST00000486572 FAM53CQ9NYF3 392 aa16.15■□□□□ 0.18
COL1A1-207ENST00000486572 NOSIPQ9Y314 301 aaKnown RBP16.15■□□□□ 0.18
COL1A1-207ENST00000486572 IGKV1D-42A0A075B6H8 117 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 A0A087WUJ7 227 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 CPSF4LA6NMK7 179 aaKnown RBP16.14■□□□□ 0.17
COL1A1-207ENST00000486572 FTCDNL1E5RQL4 147 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 GOSR1O95249 250 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 FAM107AO95990 144 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 PSMB1P20618 241 aaKnown RBP16.14■□□□□ 0.17
COL1A1-207ENST00000486572 GTF2E2P29084 291 aaKnown RBP16.14■□□□□ 0.17
COL1A1-207ENST00000486572 KDELR2P33947 212 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 CDH12P55289 794 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 PSME3P61289 254 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 SLC17A1Q14916 467 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 ENTPD8Q5MY95 495 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 RBM45Q8IUH3 476 aaKnown RBP16.14■□□□□ 0.17
COL1A1-207ENST00000486572 ZNF100Q8IYN0 542 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 ANKS4BQ8N8V4 417 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 WFIKKN1Q96NZ8 548 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 PCDHAC1Q9H158 963 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 SPAG4Q9NPE6 437 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 GMPR2Q9P2T1 348 aaKnown RBP16.14■□□□□ 0.17
COL1A1-207ENST00000486572 ABCD2Q9UBJ2 740 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 SH3GLB1Q9Y371 365 aa16.14■□□□□ 0.17
COL1A1-207ENST00000486572 LRBAP50851 2863 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 TRAV36DV7A0A075B6V5 113 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 FAM221AA4D161 298 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 CASKO14936 926 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 CHP2O43745 196 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 OR2T1O43869 369 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 PPP3CBP16298 524 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 GSK3BP49841 420 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 P2RY6Q15077 328 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 CYBRD1Q53TN4 286 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 FAM69AQ5T7M9 428 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 GKAP1Q5VSY0 366 aaPredicted RBP16.13■□□□□ 0.17
COL1A1-207ENST00000486572 Q6ZT83 130 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.13■□□□□ 0.17
COL1A1-207ENST00000486572 CXorf67Q86X51 503 aaPredicted RBP16.13■□□□□ 0.17
COL1A1-207ENST00000486572 CARM1Q86X55 608 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 ADAMTS16Q8TE57 1224 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 APH1AQ96BI3 265 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 SLC25A36Q96CQ1 311 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 EPYCQ99645 322 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 SF3B5Q9BWJ5 86 aaKnown RBP16.13■□□□□ 0.17
COL1A1-207ENST00000486572 OR10A4Q9H209 315 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 RASSF1Q9NS23 344 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 ZNF226Q9NYT6 803 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 PRSS50Q9UI38 385 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 GPR52Q9Y2T5 361 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 FLVCR1Q9Y5Y0 555 aa16.13■□□□□ 0.17
COL1A1-207ENST00000486572 MPDZO75970 2070 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 TRAPPC13A5PLN9 417 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 GSTA4O15217 222 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 SHOX2O60902 331 aaPredicted RBP16.12■□□□□ 0.17
COL1A1-207ENST00000486572 FZD7O75084 574 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 MRPL33O75394 65 aaKnown RBP16.12■□□□□ 0.17
COL1A1-207ENST00000486572 VAMP5O95183 116 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 CNOT4O95628 575 aaKnown RBP16.12■□□□□ 0.17
COL1A1-207ENST00000486572 EDNRAP25101 427 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 P2RY4P51582 365 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 ANKRD34AQ69YU3 496 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 TMEM225Q6GV28 225 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 GPAT4Q86UL3 456 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 P3H2Q8IVL5 708 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 OR9K2Q8NGE7 335 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 TAAR8Q969N4 342 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 KCTD14Q9BQ13 255 aaPredicted RBP16.12■□□□□ 0.17
COL1A1-207ENST00000486572 TMEM43Q9BTV4 400 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 HDHD5Q9BXW7 423 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 POLDIP3Q9BY77 421 aaKnown RBP16.12■□□□□ 0.17
COL1A1-207ENST00000486572 ACTR6Q9GZN1 396 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 CLEC4MQ9H2X3 399 aaPredicted RBP16.12■□□□□ 0.17
COL1A1-207ENST00000486572 C6orf203Q9P0P8 240 aaPredicted RBP16.12■□□□□ 0.17
COL1A1-207ENST00000486572 TAGLN3Q9UI15 199 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 TACC2O95359 2948 aa16.12■□□□□ 0.17
COL1A1-207ENST00000486572 CXCR6O00574 342 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 ADAP00813 363 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 TNFRSF1BP20333 461 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 SFRP5Q5T4F7 317 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 FBXW10Q5XX13 1052 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 CASP12Q6UXS9 341 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 TSPYL5Q86VY4 417 aaPredicted RBP16.11■□□□□ 0.17
COL1A1-207ENST00000486572 STEAP2Q8NFT2 490 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 OR6S1Q8NH40 331 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 LZICQ8WZA0 190 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 KISS1RQ969F8 398 aaPredicted RBP16.11■□□□□ 0.17
COL1A1-207ENST00000486572 TMEM45BQ96B21 275 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 TPD52L3Q96J77 140 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 ARL8BQ9NVJ2 186 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 PARPBPQ9NWS1 579 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 SLC7A7Q9UM01 511 aa16.11■□□□□ 0.17
COL1A1-207ENST00000486572 RASD1Q9Y272 281 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms