RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 USB1Q9BQ65 265 aaKnown RBP11.09□□□□□ -0.63
PTCD1-205ENST00000485746 NGBQ9NPG2 151 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 ING1Q9UK53 422 aaPredicted RBP11.09□□□□□ -0.63
PTCD1-205ENST00000485746 UNC79Q9P2D8 2635 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 TRAV36DV7A0A075B6V5 113 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 AQP7P3A6NL99 342 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 CPSF4LA6NMK7 179 aaKnown RBP11.08□□□□□ -0.64
PTCD1-205ENST00000485746 FAM220BPB1ANY3 271 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 TMEM229AB2RXF0 380 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 FXYD1O00168 92 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 OR2T1O43869 369 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 GCM2O75603 506 aaPredicted RBP11.08□□□□□ -0.64
PTCD1-205ENST00000485746 CD247P20963 164 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 DRD4P21917 467 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 GZMMP51124 257 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 SLC16A1P53985 500 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 FAPQ12884 760 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 C1DQ13901 141 aaKnown RBP11.08□□□□□ -0.64
PTCD1-205ENST00000485746 KEAP1Q14145 624 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 NRF1Q16656 503 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 LRRC23Q53EV4 343 aaPredicted RBP11.08□□□□□ -0.64
PTCD1-205ENST00000485746 BEX5Q5H9J7 111 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 CCDC80Q76M96 950 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 AAED1Q7RTV5 226 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 CALHM3Q86XJ0 350 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 P3H2Q8IVL5 708 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 OR2T12Q8NG77 320 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 OR9K2Q8NGE7 335 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 HSD17B8Q92506 261 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 TAMM41Q96BW9 452 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 MUCL1Q96DR8 90 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 KTI12Q96EK9 354 aaPredicted RBP11.08□□□□□ -0.64
PTCD1-205ENST00000485746 HOPXQ9BPY8 73 aaPredicted RBP11.08□□□□□ -0.64
PTCD1-205ENST00000485746 SF3B5Q9BWJ5 86 aaKnown RBP11.08□□□□□ -0.64
PTCD1-205ENST00000485746 LIME1Q9H400 295 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 ASB6Q9NWX5 421 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 ST6GALNAC2Q9UJ37 374 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 BAG5Q9UL15 447 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 RASD1Q9Y272 281 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 PLEKHA6Q9Y2H5 1048 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 FLVCR1Q9Y5Y0 555 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 PKDREJQ9NTG1 2253 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 MED12LQ86YW9 2145 aa11.08□□□□□ -0.64
PTCD1-205ENST00000485746 A0A087WUJ7 227 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 A0A0B4J2E0 115 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 A0A1B0GX12 115 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 ELOVL7A1L3X0 281 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 SNX3O60493 162 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 VAMP5O95183 116 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 CNOT4O95628 575 aaKnown RBP11.07□□□□□ -0.64
PTCD1-205ENST00000485746 NQO1P15559 274 aaKnown RBP11.07□□□□□ -0.64
PTCD1-205ENST00000485746 GGT1P19440 569 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 PTNP21246 168 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 NUDT2P50583 147 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 CDH12P55289 794 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 VEZF1Q14119 521 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 SLC17A1Q14916 467 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 ENTPD8Q5MY95 495 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 FAM69AQ5T7M9 428 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 ZNF613Q6PF04 617 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 TTC33Q6PID6 262 aaPredicted RBP11.07□□□□□ -0.64
PTCD1-205ENST00000485746 C6orf89Q6UWU4 347 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 MICU2Q8IYU8 434 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 GPR32P1Q8NGA4 272 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 OR6T1Q8NGN1 323 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 TAAR8Q969N4 342 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 PLPPR2Q96GM1 343 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 TPD52L3Q96J77 140 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 ZNF583Q96ND8 569 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 WFDC6Q9BQY6 131 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 ASPNQ9BXN1 380 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 RSPO3Q9BXY4 272 aaPredicted RBP11.07□□□□□ -0.64
PTCD1-205ENST00000485746 UBTD1Q9HAC8 227 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 CCM2LQ9NUG4 571 aaPredicted RBP11.07□□□□□ -0.64
PTCD1-205ENST00000485746 USP22Q9UPT9 525 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 SH3GLB1Q9Y371 365 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 ADGRG4Q8IZF6 3080 aa11.07□□□□□ -0.64
PTCD1-205ENST00000485746 HEATR5AQ86XA9 2040 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 TRAPPC13A5PLN9 417 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 DEFB108AA8MXU0 73 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 NDUFAB1O14561 156 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 FMO6PO60774 539 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 NPIPB7O75200 414 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 RAF1P04049 648 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 THBDP07204 575 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 ZNF43P17038 809 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 IGHV1-2P23083 117 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 EDNRAP25101 427 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 GRPRP30550 384 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 ART1P52961 327 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 IST1P53990 364 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 NR1H2P55055 460 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 TAS2R41P59536 307 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 EGR4Q05215 589 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 LIPEQ05469 1076 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 FOXD4Q12950 439 aaPredicted RBP11.06□□□□□ -0.64
PTCD1-205ENST00000485746 MFSD13AQ14CX5 517 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 PPA1Q15181 289 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 C9orf135Q5VTT2 229 aa11.06□□□□□ -0.64
PTCD1-205ENST00000485746 DEF8Q6ZN54 512 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms