RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 C3orf36Q3SXR2 165 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 LIPNQ5VXI9 398 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 SAXO2Q658L1 398 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 OR4F3Q6IEY1 312 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 CASP12Q6UXS9 341 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 OLIG3Q7RTU3 272 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 CLECL1Q8IZS7 167 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 ZIC4Q8N9L1 334 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 AGR3Q8TD06 166 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 XAGE5Q8WWM1 108 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 ZBTB9Q96C00 473 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 ROPN1LQ96C74 230 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 DDIT4LQ96D03 193 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 SORCS2Q96PQ0 1159 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 TMEM45AQ9NWC5 275 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 OSGIN1Q9UJX0 560 aa11.36□□□□□ -0.59
HDAC6-227ENST00000485102 TMED7-TICAM2A0A0A6YYA0 188 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 IGHV4-61A0A0C4DH41 118 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 B9A039 149 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 ATP6V1G2-DDX39BF2Z307 99 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 POLR3GO15318 223 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-227ENST00000485102 EDF1O60869 148 aaKnown RBP11.35□□□□□ -0.59
HDAC6-227ENST00000485102 LY6HO94772 140 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 APEHP13798 732 aaKnown RBP11.35□□□□□ -0.59
HDAC6-227ENST00000485102 ZNF23P17027 643 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 RYKP34925 604 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 SERPINF1P36955 418 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 SLC1A3P43003 542 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 IDH2P48735 452 aaKnown RBP11.35□□□□□ -0.59
HDAC6-227ENST00000485102 POLR2HP52434 150 aaKnown RBP11.35□□□□□ -0.59
HDAC6-227ENST00000485102 SNRPD2P62316 118 aaKnown RBP11.35□□□□□ -0.59
HDAC6-227ENST00000485102 TXNL4AP83876 142 aaKnown RBP11.35□□□□□ -0.59
HDAC6-227ENST00000485102 LRRC74AQ0VAA2 488 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 FUT5Q11128 374 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 GGTLC2Q14390 218 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 EFNB3Q15768 340 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 GSTA3Q16772 222 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 DPY19L1Q2PZI1 675 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 PGS1Q32NB8 556 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 METTL21CQ5VZV1 264 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 OGFOD2Q6N063 350 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 ABHD12BQ7Z5M8 362 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-227ENST00000485102 CLEC4FQ8N1N0 589 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 FAM169BQ8N8A8 192 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 VPS37AQ8NEZ2 397 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 TESCQ96BS2 214 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 FBXO17Q96EF6 278 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 NEURL3Q96EH8 262 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 FOXN4Q96NZ1 517 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 CCDC28BQ9BUN5 200 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 KATNB1Q9BVA0 655 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 ADAM19Q9H013 955 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 RABEP2Q9H5N1 569 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 MOV10Q9HCE1 1003 aaKnown RBP11.35□□□□□ -0.59
HDAC6-227ENST00000485102 CRNNQ9UBG3 495 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-227ENST00000485102 MOKQ9UQ07 419 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 TMED7Q9Y3B3 224 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 USH1CQ9Y6N9 552 aa11.35□□□□□ -0.59
HDAC6-227ENST00000485102 PRAMEF27A3QJZ7 478 aa11.34□□□□□ -0.59
HDAC6-227ENST00000485102 AGAP5A6NIR3 686 aa11.34□□□□□ -0.59
HDAC6-227ENST00000485102 SKAP2O75563 359 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-227ENST00000485102 HOXB1P14653 301 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-227ENST00000485102 IDO1P14902 403 aa11.34□□□□□ -0.59
HDAC6-227ENST00000485102 GIFP27352 417 aa11.34□□□□□ -0.59
HDAC6-227ENST00000485102 CLNS1AP54105 237 aaKnown RBP11.34□□□□□ -0.59
HDAC6-227ENST00000485102 STX1BP61266 288 aa11.34□□□□□ -0.59
HDAC6-227ENST00000485102 PDCD2Q16342 344 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-227ENST00000485102 ZSWIM7Q19AV6 140 aa11.34□□□□□ -0.59
HDAC6-227ENST00000485102 ANXA8L1Q5VT79 327 aa11.34□□□□□ -0.59
HDAC6-227ENST00000485102 KLHL24Q6TFL4 600 aa11.34□□□□□ -0.59
HDAC6-227ENST00000485102 RFLNBQ8N5W9 214 aa11.34□□□□□ -0.59
HDAC6-227ENST00000485102 MAGEE2Q8TD90 523 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-227ENST00000485102 CNOT9Q92600 299 aaKnown RBP11.34□□□□□ -0.59
HDAC6-227ENST00000485102 RAB8BQ92930 207 aa11.34□□□□□ -0.59
HDAC6-227ENST00000485102 TRNT1Q96Q11 434 aaKnown RBP11.34□□□□□ -0.59
HDAC6-227ENST00000485102 NUF2Q9BZD4 464 aa11.34□□□□□ -0.59
HDAC6-227ENST00000485102 PLK3Q9H4B4 646 aa11.34□□□□□ -0.59
HDAC6-227ENST00000485102 CA10Q9NS85 328 aa11.34□□□□□ -0.59
HDAC6-227ENST00000485102 ARPC4-TTLL3A0A0A6YYG9 625 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 IGHV1-18A0A0C4DH31 117 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 TMEM72A0PK05 275 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 OR6C65A6NJZ3 312 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 CLDN24A6NM45 220 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 HAX1O00165 279 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 HMGN4O00479 90 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 VAMP5O95183 116 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 TGFAP01135 160 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 CRYAAP02489 173 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 TACSTD2P09758 323 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 KITP10721 976 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 RPS4Y1P22090 263 aaKnown RBP11.33□□□□□ -0.6
HDAC6-227ENST00000485102 TACR3P29371 465 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 PPOXP50336 477 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 GUCY1A3Q02108 690 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 ADIPOQQ15848 244 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 C9orf135Q5VTT2 229 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 TNFAIP8L2Q6P589 184 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-227ENST00000485102 ANKRD16Q6P6B7 361 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 LRRC74BQ6ZQY2 392 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 GLB1L3Q8NCI6 653 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms