RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 KCNS3Q9BQ31 491 aa17.7■□□□□ 0.42
ACTB-212ENST00000484841 RAD21L1Q9H4I0 556 aa17.7■□□□□ 0.42
ACTB-212ENST00000484841 HEATR1Q9H583 2144 aaKnown RBP17.7■□□□□ 0.42
ACTB-212ENST00000484841 PIF1Q9H611 641 aa17.7■□□□□ 0.42
ACTB-212ENST00000484841 YAE1D1Q9NRH1 226 aa17.7■□□□□ 0.42
ACTB-212ENST00000484841 ZNF443Q9Y2A4 671 aaPredicted RBP17.7■□□□□ 0.42
ACTB-212ENST00000484841 IFT52Q9Y366 437 aa17.7■□□□□ 0.42
ACTB-212ENST00000484841 CHD3Q12873 2000 aaKnown RBP17.7■□□□□ 0.42
ACTB-212ENST00000484841 CR1P17927 2039 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 A0A096LPI6 279 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 A0A0G2JPF8 293 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 LIPT2A6NK58 231 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 HNRNPCL2B2RXH8 293 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 HNRNPCL3B7ZW38 293 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 HNRNPCL1O60812 293 aaKnown RBP17.69■□□□□ 0.42
ACTB-212ENST00000484841 ERLIN1O75477 346 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 HNRNPCL4P0DMR1 293 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 GTF2E2P29084 291 aaKnown RBP17.69■□□□□ 0.42
ACTB-212ENST00000484841 FOXG1P55316 489 aaPredicted RBP17.69■□□□□ 0.42
ACTB-212ENST00000484841 STX1BP61266 288 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 MAGOHP61326 146 aaKnown RBP17.69■□□□□ 0.42
ACTB-212ENST00000484841 SPOCK1Q08629 439 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 SLC9B1Q4ZJI4 515 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 ZNF544Q6NX49 715 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 SLC38A5Q8WUX1 472 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 SLC17A5Q9NRA2 495 aa17.69■□□□□ 0.42
ACTB-212ENST00000484841 SDR39U1Q9NRG7 319 aaPredicted RBP17.69■□□□□ 0.42
ACTB-212ENST00000484841 AQP7P3A6NL99 342 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 KIAA1324LA8MWY0 1029 aaPredicted RBP17.68■□□□□ 0.42
ACTB-212ENST00000484841 C5orf58C9J3I9 102 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 VAMP5O95183 116 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 TFPTP0C1Z6 253 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 BNIP2Q12982 314 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 RNF220Q5VTB9 566 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 WDR31Q8NA23 367 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 AURKBQ96GD4 344 aaPredicted RBP17.68■□□□□ 0.42
ACTB-212ENST00000484841 TMEM19Q96HH6 336 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 MAELQ96JY0 434 aaKnown RBP17.68■□□□□ 0.42
ACTB-212ENST00000484841 SPATA9Q9BWV2 254 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 TMEM45AQ9NWC5 275 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 RPS6KB2Q9UBS0 482 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 PMF1-BGLAPU3KQ54 211 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 DSPPQ9NZW4 1301 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 HIVEP2P31629 2446 aa17.68■□□□□ 0.42
ACTB-212ENST00000484841 FN1P02751 2386 aaKnown RBP17.67■□□□□ 0.42
ACTB-212ENST00000484841 ABCA2Q9BZC7 2435 aa17.67■□□□□ 0.42
ACTB-212ENST00000484841 PDLIM1O00151 329 aa17.67■□□□□ 0.42
ACTB-212ENST00000484841 CD5LO43866 347 aa17.67■□□□□ 0.42
ACTB-212ENST00000484841 AHSA1O95433 338 aa17.67■□□□□ 0.42
ACTB-212ENST00000484841 PAX7P23759 505 aa17.67■□□□□ 0.42
ACTB-212ENST00000484841 ACAA2P42765 397 aaKnown RBP17.67■□□□□ 0.42
ACTB-212ENST00000484841 IRX1P78414 480 aaPredicted RBP17.67■□□□□ 0.42
ACTB-212ENST00000484841 ZNF311Q5JNZ3 666 aa17.67■□□□□ 0.42
ACTB-212ENST00000484841 RPS26P11Q5JNZ5 115 aaPredicted RBP17.67■□□□□ 0.42
ACTB-212ENST00000484841 C1orf140Q5VVS0 124 aa17.67■□□□□ 0.42
ACTB-212ENST00000484841 PRAMEF8Q5VWM4 474 aa17.67■□□□□ 0.42
ACTB-212ENST00000484841 PRAMEF7Q5VXH5 474 aa17.67■□□□□ 0.42
ACTB-212ENST00000484841 ZNF385AQ96PM9 386 aaKnown RBP17.67■□□□□ 0.42
ACTB-212ENST00000484841 AMBRA1Q9C0C7 1298 aa17.67■□□□□ 0.42
ACTB-212ENST00000484841 SLC6A13Q9NSD5 602 aa17.67■□□□□ 0.42
ACTB-212ENST00000484841 CADP27708 2225 aa17.66■□□□□ 0.42
ACTB-212ENST00000484841 OR6C65A6NJZ3 312 aa17.66■□□□□ 0.42
ACTB-212ENST00000484841 ZNF587BE7ETH6 402 aa17.66■□□□□ 0.42
ACTB-212ENST00000484841 APOBEC3AP31941 199 aaPredicted RBP17.66■□□□□ 0.42
ACTB-212ENST00000484841 MVDP53602 400 aa17.66■□□□□ 0.42
ACTB-212ENST00000484841 UBE2NP61088 152 aaKnown RBP17.66■□□□□ 0.42
ACTB-212ENST00000484841 MAPK11Q15759 364 aa17.66■□□□□ 0.42
ACTB-212ENST00000484841 GTDC1Q4AE62 458 aa17.66■□□□□ 0.42
ACTB-212ENST00000484841 DNM1P46Q6ZS02 220 aa17.66■□□□□ 0.42
ACTB-212ENST00000484841 CLIP4Q8N3C7 705 aa17.66■□□□□ 0.42
ACTB-212ENST00000484841 VPS33AQ96AX1 596 aa17.66■□□□□ 0.42
ACTB-212ENST00000484841 OBP2BQ9NPH6 170 aa17.66■□□□□ 0.42
ACTB-212ENST00000484841 RASD1Q9Y272 281 aa17.66■□□□□ 0.42
ACTB-212ENST00000484841 NSD1Q96L73 2696 aaPredicted RBP17.66■□□□□ 0.42
ACTB-212ENST00000484841 ELOA3DA6NLF2 546 aaPredicted RBP17.65■□□□□ 0.42
ACTB-212ENST00000484841 CLIC1O00299 241 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 FRS3O43559 492 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 IFNA2P01563 188 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 KRTAP1-1Q07627 177 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 FADDQ13158 208 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 ELOA3BQ3SY89 546 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 C11orf71Q6IPW1 123 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 NIPAL3Q6P499 406 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 B3GLCTQ6Y288 498 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 SERPINA11Q86U17 422 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 GOLGA6L1Q8N7Z2 621 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 ELOA3Q8NG57 546 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 OR9I1Q8NGQ6 314 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 BBS10Q8TAM1 723 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 STK35Q8TDR2 534 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 SLC25A36Q96CQ1 311 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 OR52B2Q96RD2 323 aa17.65■□□□□ 0.42
ACTB-212ENST00000484841 KLF11O14901 512 aa17.64■□□□□ 0.41
ACTB-212ENST00000484841 POLR3GO15318 223 aaPredicted RBP17.64■□□□□ 0.41
ACTB-212ENST00000484841 CSF3P09919 207 aa17.64■□□□□ 0.41
ACTB-212ENST00000484841 PRG2P13727 222 aa17.64■□□□□ 0.41
ACTB-212ENST00000484841 SLC25A16P16260 332 aa17.64■□□□□ 0.41
ACTB-212ENST00000484841 RGNQ15493 299 aa17.64■□□□□ 0.41
ACTB-212ENST00000484841 HMBOX1Q6NT76 420 aa17.64■□□□□ 0.41
ACTB-212ENST00000484841 SLC2A7Q6PXP3 512 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms