RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 CLEC2AQ6UVW9 174 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 ZNF836Q6ZNA1 936 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 AAED1Q7RTV5 226 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 TMEM99Q8N816 258 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 STK35Q8TDR2 534 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 SLC35B4Q969S0 331 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 SPATA9Q9BWV2 254 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 CENPHQ9H3R5 247 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 RMND5AQ9H871 391 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 YAE1D1Q9NRH1 226 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 ZNF443Q9Y2A4 671 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-206ENST00000484733 A0A0G2JPF8 293 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 A0A1W2PR80 420 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 FAM234BA2RU67 622 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 OR6C65A6NJZ3 312 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 HNRNPCL2B2RXH8 293 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 HNRNPCL3B7ZW38 293 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 HNRNPCL1O60812 293 aaKnown RBP10.03□□□□□ -0.8
SCFD1-206ENST00000484733 FZD7O75084 574 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 CSF3P09919 207 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 HNRNPCL4P0DMR1 293 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 SLC25A3Q00325 362 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 RAB35Q15286 201 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 C3orf36Q3SXR2 165 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 PRAMEF8Q5VWM4 474 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 PRAMEF7Q5VXH5 474 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 VRK2Q86Y07 508 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 PNPT1Q8TCS8 783 aaKnown RBP10.03□□□□□ -0.8
SCFD1-206ENST00000484733 PROX1Q92786 737 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 ITCHQ96J02 903 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 TAPBPLQ9BX59 468 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 ARMC7Q9H6L4 198 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 SLC6A13Q9NSD5 602 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 TMEM160Q9NX00 188 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 ZNF232Q9UNY5 417 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 IFT52Q9Y366 437 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 ATP23Q9Y6H3 246 aa10.03□□□□□ -0.8
SCFD1-206ENST00000484733 TMEM229AB2RXF0 380 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 NPIPB7O75200 414 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 AKR7A3O95154 331 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 GKN3PP0CG01 181 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 BMP4P12644 408 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 ETFAP13804 333 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 PTNP21246 168 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 DSTNP60981 165 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 COPZ1P61923 177 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 LARS2Q15031 903 aaKnown RBP10.02□□□□□ -0.8
SCFD1-206ENST00000484733 OR7A5Q15622 319 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 PODNL1Q6PEZ8 512 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 ANKRD42Q8N9B4 389 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 MAGEE2Q8TD90 523 aaPredicted RBP10.02□□□□□ -0.8
SCFD1-206ENST00000484733 SLC38A5Q8WUX1 472 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 ZNF385AQ96PM9 386 aaKnown RBP10.02□□□□□ -0.8
SCFD1-206ENST00000484733 ZNF317Q96PQ6 595 aaPredicted RBP10.02□□□□□ -0.8
SCFD1-206ENST00000484733 TNFRSF13CQ96RJ3 184 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 TPT1P8Q9HAU6 139 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 SDR39U1Q9NRG7 319 aaPredicted RBP10.02□□□□□ -0.8
SCFD1-206ENST00000484733 RLIMQ9NVW2 624 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 RASD1Q9Y272 281 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 PMF1-BGLAPU3KQ54 211 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 CSPG4Q6UVK1 2322 aa10.02□□□□□ -0.8
SCFD1-206ENST00000484733 ZANQ9Y493 2812 aa10.02□□□□□ -0.81
SCFD1-206ENST00000484733 TMEM120BA0PK00 339 aa10.02□□□□□ -0.81
SCFD1-206ENST00000484733 A8MV72 311 aaPredicted RBP10.02□□□□□ -0.81
SCFD1-206ENST00000484733 FRS3O43559 492 aa10.02□□□□□ -0.81
SCFD1-206ENST00000484733 IFNA2P01563 188 aa10.02□□□□□ -0.81
SCFD1-206ENST00000484733 HOXB1P14653 301 aaPredicted RBP10.02□□□□□ -0.81
SCFD1-206ENST00000484733 MRPL19P49406 292 aaKnown RBP10.02□□□□□ -0.81
SCFD1-206ENST00000484733 EFNA4P52798 201 aa10.02□□□□□ -0.81
SCFD1-206ENST00000484733 VLDLRP98155 873 aa10.02□□□□□ -0.81
SCFD1-206ENST00000484733 SWI5Q1ZZU3 235 aa10.02□□□□□ -0.81
SCFD1-206ENST00000484733 CREB3L2Q70SY1 520 aa10.02□□□□□ -0.81
SCFD1-206ENST00000484733 C1QTNF6Q9BXI9 259 aa10.02□□□□□ -0.81
SCFD1-206ENST00000484733 LINC00470Q9BZP3 86 aa10.02□□□□□ -0.81
SCFD1-206ENST00000484733 BCL2L10Q9HD36 194 aa10.02□□□□□ -0.81
SCFD1-206ENST00000484733 TMEM45AQ9NWC5 275 aa10.02□□□□□ -0.81
SCFD1-206ENST00000484733 CRNNQ9UBG3 495 aaPredicted RBP10.02□□□□□ -0.81
SCFD1-206ENST00000484733 CHST2Q9Y4C5 530 aa10.02□□□□□ -0.81
SCFD1-206ENST00000484733 ARPC4-TTLL3A0A0A6YYG9 625 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 ANP32DO95626 131 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 BMP2P12643 396 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 CRATP43155 626 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 C9orf135Q5VTT2 229 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 C1orf140Q5VVS0 124 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 NXNQ6DKJ4 435 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 TMEM225Q6GV28 225 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 HMBOX1Q6NT76 420 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 KLHL24Q6TFL4 600 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 CLIP4Q8N3C7 705 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 FAM169BQ8N8A8 192 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 MFSD8Q8NHS3 518 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 C10orf105Q8TEF2 133 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 C3orf49Q96BT1 292 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 AURKBQ96GD4 344 aaPredicted RBP10.01□□□□□ -0.81
SCFD1-206ENST00000484733 TMEM19Q96HH6 336 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 RAD21L1Q9H4I0 556 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 C12orf10Q9HB07 376 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 MOV10Q9HCE1 1003 aaKnown RBP10.01□□□□□ -0.81
SCFD1-206ENST00000484733 TMEM247A6NEH6 219 aa10.01□□□□□ -0.81
SCFD1-206ENST00000484733 ZNF500O60304 480 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms