RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 A0A1W2PR80 420 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 PRORSD1PA6NEY8 169 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 AQP7P3A6NL99 342 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 M0QX08 132 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 FXYD1O00168 92 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 TPST2O60704 377 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 NPIPB7O75200 414 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 SERPINB7O75635 380 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 MFN2O95140 757 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 COX5AP20674 150 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 CBLP22681 906 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 PCBP3P57721 371 aaKnown RBP10.84□□□□□ -0.67
MSH5-216ENST00000484309 EGR4Q05215 589 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 FAPQ12884 760 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 SLC17A1Q14916 467 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 ALG10BQ5I7T1 473 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 FBXW9Q5XUX1 488 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 NANOGP8Q6NSW7 305 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 ZNF704Q6ZNC4 412 aaPredicted RBP10.84□□□□□ -0.67
MSH5-216ENST00000484309 KDM8Q8N371 416 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 POU5F2Q8N7G0 328 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 ZNF433Q8N7K0 673 aaPredicted RBP10.84□□□□□ -0.67
MSH5-216ENST00000484309 OR9K2Q8NGE7 335 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 VANGL1Q8TAA9 524 aaPredicted RBP10.84□□□□□ -0.67
MSH5-216ENST00000484309 C10orf82Q8WW14 230 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 SLC35B4Q969S0 331 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 ZNF385AQ96PM9 386 aaKnown RBP10.84□□□□□ -0.67
MSH5-216ENST00000484309 PTDSS2Q9BVG9 487 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 HDHD5Q9BXW7 423 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 OR10A4Q9H209 315 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 NANOGQ9H9S0 305 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 KLHL14Q9P2G3 628 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 TESQ9UGI8 421 aaKnown RBP10.84□□□□□ -0.67
MSH5-216ENST00000484309 SLC9A8Q9Y2E8 581 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 CAPN7Q9Y6W3 813 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 PLCE1Q9P212 2302 aa10.84□□□□□ -0.67
MSH5-216ENST00000484309 USF3Q68DE3 2245 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 IGKV1D-42A0A075B6H8 117 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 CIB4A0PJX0 185 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 CCT8L1PA6NM43 557 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 CLOCKO15516 846 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 PNMTP11086 282 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 GGT1P19440 569 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 GTF2E2P29084 291 aaKnown RBP10.83□□□□□ -0.68
MSH5-216ENST00000484309 PCGF2P35227 344 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 GZMMP51124 257 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 P2RY4P51582 365 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 RBBP4Q09028 425 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 CYLC2Q14093 348 aaPredicted RBP10.83□□□□□ -0.68
MSH5-216ENST00000484309 MAPRE2Q15555 327 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 OR1Q1Q15612 314 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 ACKR1Q16570 336 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 DUSP7Q16829 419 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 TSPO2Q5TGU0 170 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 TMEM225Q6GV28 225 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 SEZ6L2Q6UXD5 910 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 AAED1Q7RTV5 226 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 NET1Q7Z628 596 aaPredicted RBP10.83□□□□□ -0.68
MSH5-216ENST00000484309 GPR32P1Q8NGA4 272 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 STK35Q8TDR2 534 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 HSD17B8Q92506 261 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 NEUROG1Q92886 237 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 TAMM41Q96BW9 452 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 LRRC58Q96CX6 371 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 MBD6Q96DN6 1003 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 ZNF317Q96PQ6 595 aaPredicted RBP10.83□□□□□ -0.68
MSH5-216ENST00000484309 ALPK1Q96QP1 1244 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 CCL19Q99731 98 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 TRIM2Q9C040 744 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 CXXC4Q9H2H0 198 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 SLC7A10Q9NS82 523 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 ASB6Q9NWX5 421 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 UPB1Q9UBR1 384 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 ALPK2Q86TB3 2170 aa10.83□□□□□ -0.68
MSH5-216ENST00000484309 A0A0B4J2E0 115 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 A0A1B0GX12 115 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 CPSF4LA6NMK7 179 aaKnown RBP10.82□□□□□ -0.68
MSH5-216ENST00000484309 FTCDNL1E5RQL4 147 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 ITGA5P08648 1049 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 NR1H2P55055 460 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 BSPH1Q075Z2 132 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 LGALS3BPQ08380 585 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 PPA1Q15181 289 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 NPTX1Q15818 432 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 VMACQ2NL98 169 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 NCMAPQ5T1S8 102 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 ULK3Q6PHR2 472 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 C6orf89Q6UWU4 347 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 RANBP3LQ86VV4 465 aaPredicted RBP10.82□□□□□ -0.68
MSH5-216ENST00000484309 RBM45Q8IUH3 476 aaKnown RBP10.82□□□□□ -0.68
MSH5-216ENST00000484309 LSMEM1Q8N8F7 131 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 ZIC4Q8N9L1 334 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 BHLHE22Q8NFJ8 381 aaPredicted RBP10.82□□□□□ -0.68
MSH5-216ENST00000484309 OR4D11Q8NGI4 311 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 OR52N5Q8NH56 324 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 MFSD8Q8NHS3 518 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 SLC26A7Q8TE54 656 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 TAAR8Q969N4 342 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 RCN3Q96D15 328 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 MCHR1Q99705 422 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms