RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 ALKBH2Q6NS38 261 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 C6orf89Q6UWU4 347 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 ZNF704Q6ZNC4 412 aaPredicted RBP8.89□□□□□ -0.99
CPSF4-213ENST00000484112 RANBP3LQ86VV4 465 aaPredicted RBP8.89□□□□□ -0.99
CPSF4-213ENST00000484112 CLIP4Q8N3C7 705 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 RCN3Q96D15 328 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 ZNF583Q96ND8 569 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 LRRC37BQ96QE4 947 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 FAM107BQ9H098 131 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 CXorf56Q9H5V9 222 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 PIF1Q9H611 641 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 TMEM185BQ9H7F4 350 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 COQ10BQ9H8M1 238 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 CTPS2Q9NRF8 586 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 PLSCR4Q9NRQ2 329 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 TMEM181Q9P2C4 612 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 KLHL9Q9P2J3 617 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 OSGIN1Q9UJX0 560 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 TMED7Q9Y3B3 224 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 CHST2Q9Y4C5 530 aa8.89□□□□□ -0.99
CPSF4-213ENST00000484112 DSCAMO60469 2012 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 ZNF724A8MTY0 619 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 A8MVM7 634 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 RNF223E7ERA6 249 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 M0QX08 132 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 SULT2B1O00204 365 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 CYTIPO60759 359 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 SHOX2O60902 331 aaPredicted RBP8.88□□□□□ -0.99
CPSF4-213ENST00000484112 AQP8O94778 261 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 LGI1O95970 557 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 CGAP01215 116 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 GKN3PP0CG01 181 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 DIO1P49895 249 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 MNAT1P51948 309 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 CTBP2P56545 445 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 NCALDP61601 193 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 SLC35A1P78382 337 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 DMTNQ08495 405 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 SF3A3Q12874 501 aaKnown RBP eCLIP8.88□□□□□ -0.996e-9■■■■■ 32.1
CPSF4-213ENST00000484112 BEX5Q5H9J7 111 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 RABL3Q5HYI8 236 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 C8orf82Q6P1X6 216 aaPredicted RBP8.88□□□□□ -0.99
CPSF4-213ENST00000484112 ULK3Q6PHR2 472 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 FCRLAQ7L513 359 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 HMGN2P46Q86SG4 172 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 STK32CQ86UX6 486 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 WFDC8Q8IUA0 241 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 OR2T12Q8NG77 320 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 STK35Q8TDR2 534 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 SLC26A7Q8TE54 656 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 ZNF524Q96C55 264 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 OR5B2Q96R09 309 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 CCT8L2Q96SF2 557 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 POLR2J2Q9GZM3 115 aaKnown RBP8.88□□□□□ -0.99
CPSF4-213ENST00000484112 POLR2J3Q9H1A7 115 aaKnown RBP8.88□□□□□ -0.99
CPSF4-213ENST00000484112 BCO1Q9HAY6 547 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 NDE1Q9NXR1 346 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 KLHL13Q9P2N7 655 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 RPS6KB2Q9UBS0 482 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 BAG5Q9UL15 447 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 LAMP3Q9UQV4 416 aa8.88□□□□□ -0.99
CPSF4-213ENST00000484112 NSD1Q96L73 2696 aaPredicted RBP8.87□□□□□ -0.99
CPSF4-213ENST00000484112 IGKV3D-15A0A087WSY6 115 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 ELOVL7A1L3X0 281 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 GPR171O14626 319 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 AIM2O14862 343 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 KLF4O43474 513 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 OR2T1O43869 369 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 FZD7O75084 574 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 TP53P04637 393 aaPredicted RBP8.87□□□□□ -0.99
CPSF4-213ENST00000484112 GPIP06744 558 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 THBDP07204 575 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 YES1P07947 543 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 TFPIP10646 304 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 SHC1P29353 583 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 AQP1P29972 269 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 SLC16A1P53985 500 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 GYS2P54840 703 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 RGS8P57771 180 aaPredicted RBP8.87□□□□□ -0.99
CPSF4-213ENST00000484112 H3F3AP84243 136 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 CLEC12BQ2HXU8 276 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 SPATS1Q496A3 300 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 TMEM201Q5SNT2 666 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 ZNF613Q6PF04 617 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 BEND4Q6ZU67 534 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 ATG4DQ86TL0 474 aaPredicted RBP8.87□□□□□ -0.99
CPSF4-213ENST00000484112 TREML1Q86YW5 311 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 PHC2Q8IXK0 858 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 SLC15A3Q8IY34 581 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 CADM2Q8N3J6 435 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 POU5F2Q8N7G0 328 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 ATP6V1C2Q8NEY4 427 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 OR52E4Q8NGH9 312 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 OR6S1Q8NH40 331 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 PIGXQ8TBF5 258 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 C3orf49Q96BT1 292 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 SLC47A1Q96FL8 570 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 PLPPR2Q96GM1 343 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 ARHGDIGQ99819 225 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 USB1Q9BQ65 265 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms