RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 GPR52Q9Y2T5 361 aa15.97■□□□□ 0.15
HDAC6-225ENST00000483506 IGKV1D-42A0A075B6H8 117 aa15.96■□□□□ 0.15
HDAC6-225ENST00000483506 A0A087WUJ7 227 aa15.96■□□□□ 0.15
HDAC6-225ENST00000483506 ELOVL7A1L3X0 281 aa15.96■□□□□ 0.15
HDAC6-225ENST00000483506 AHSA1O95433 338 aa15.96■□□□□ 0.15
HDAC6-225ENST00000483506 PPP3CBP16298 524 aa15.96■□□□□ 0.15
HDAC6-225ENST00000483506 NUDT2P50583 147 aa15.96■□□□□ 0.15
HDAC6-225ENST00000483506 OR7A5Q15622 319 aa15.96■□□□□ 0.15
HDAC6-225ENST00000483506 Q6ZT83 130 aa15.96■□□□□ 0.15
HDAC6-225ENST00000483506 OR4D11Q8NGI4 311 aa15.96■□□□□ 0.15
HDAC6-225ENST00000483506 OR6S1Q8NH40 331 aa15.96■□□□□ 0.15
HDAC6-225ENST00000483506 SLC26A7Q8TE54 656 aa15.96■□□□□ 0.15
HDAC6-225ENST00000483506 WFIKKN1Q96NZ8 548 aa15.96■□□□□ 0.15
HDAC6-225ENST00000483506 TAPBPLQ9BX59 468 aa15.96■□□□□ 0.15
HDAC6-225ENST00000483506 CREBBPQ92793 2442 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 NME4O00746 187 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 NDUFAB1O14561 156 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 IFNA14P01570 189 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 EDNRAP25101 427 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 SLC7A2P52569 658 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 P2RY6Q15077 328 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 OTUD3Q5T2D3 398 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-225ENST00000483506 LINC00114Q6XXX2 140 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 TMEM200AQ86VY9 491 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 TMEM99Q8N816 258 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 TMEM45BQ96B21 275 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 KTI12Q96EK9 354 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-225ENST00000483506 MCHR1Q99705 422 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 TMEM43Q9BTV4 400 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 HDHD5Q9BXW7 423 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 BAG5Q9UL15 447 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 SLC9A8Q9Y2E8 581 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 FLVCR1Q9Y5Y0 555 aa15.95■□□□□ 0.14
HDAC6-225ENST00000483506 TRAV36DV7A0A075B6V5 113 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 CHP2O43745 196 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 OR2T1O43869 369 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 DCTN3O75935 186 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 AKR7A3O95154 331 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 VAMP5O95183 116 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 LYPD3O95274 346 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 CRYGSP22914 178 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 KDELR2P33947 212 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 NTF4P34130 210 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 CDH12P55289 794 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 LIPEQ05469 1076 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 POU4F3Q15319 338 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 ENTPD8Q5MY95 495 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 FAM69AQ5T7M9 428 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 C22orf34Q6ZV56 151 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 RBM45Q8IUH3 476 aaKnown RBP15.94■□□□□ 0.14
HDAC6-225ENST00000483506 PROX1Q92786 737 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 ZNF775Q96BV0 537 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-225ENST00000483506 LRRC37BQ96QE4 947 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 CCT8L2Q96SF2 557 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 MED18Q9BUE0 208 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 KLHL4Q9C0H6 718 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 CLEC4MQ9H2X3 399 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-225ENST00000483506 ALG2Q9H553 416 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 ADPRHL2Q9NX46 363 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 ZNF226Q9NYT6 803 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 SELENONQ9NZV5 590 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 PRSS50Q9UI38 385 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 NOSIPQ9Y314 301 aaKnown RBP15.94■□□□□ 0.14
HDAC6-225ENST00000483506 MYO9AB2RTY4 2548 aa15.94■□□□□ 0.14
HDAC6-225ENST00000483506 AKAP9Q99996 3911 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 OTOGQ6ZRI0 2925 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 SHOX2O60902 331 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-225ENST00000483506 HRGP04196 525 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 COX5AP20674 150 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 RPS5P46782 204 aaKnown RBP15.93■□□□□ 0.14
HDAC6-225ENST00000483506 GSK3BP49841 420 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 CYBRD1Q53TN4 286 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 SFRP5Q5T4F7 317 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 TSPYL5Q86VY4 417 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-225ENST00000483506 CXorf67Q86X51 503 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-225ENST00000483506 ZIC4Q8N9L1 334 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 STEAP2Q8NFT2 490 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 OR9K2Q8NGE7 335 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 ADAMTS16Q8TE57 1224 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 TAAR8Q969N4 342 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 APH1AQ96BI3 265 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 EPYCQ99645 322 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 USB1Q9BQ65 265 aaKnown RBP15.93■□□□□ 0.14
HDAC6-225ENST00000483506 ZNF426Q9BUY5 554 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 POLDIP3Q9BY77 421 aaKnown RBP15.93■□□□□ 0.14
HDAC6-225ENST00000483506 POLR2J2Q9GZM3 115 aaKnown RBP15.93■□□□□ 0.14
HDAC6-225ENST00000483506 ACTR6Q9GZN1 396 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 POLR2J3Q9H1A7 115 aaKnown RBP15.93■□□□□ 0.14
HDAC6-225ENST00000483506 GMPR2Q9P2T1 348 aaKnown RBP15.93■□□□□ 0.14
HDAC6-225ENST00000483506 MALT1Q9UDY8 824 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 RASD1Q9Y272 281 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 CCDC168Q8NDH2 2452 aa15.93■□□□□ 0.14
HDAC6-225ENST00000483506 TRAPPC13A5PLN9 417 aa15.92■□□□□ 0.14
HDAC6-225ENST00000483506 DEFB108AA8MXU0 73 aa15.92■□□□□ 0.14
HDAC6-225ENST00000483506 CASKO14936 926 aa15.92■□□□□ 0.14
HDAC6-225ENST00000483506 MRPL33O75394 65 aaKnown RBP15.92■□□□□ 0.14
HDAC6-225ENST00000483506 FAM107AO95990 144 aa15.92■□□□□ 0.14
HDAC6-225ENST00000483506 ADAP00813 363 aa15.92■□□□□ 0.14
HDAC6-225ENST00000483506 THY1P04216 161 aa15.92■□□□□ 0.14
HDAC6-225ENST00000483506 THBDP07204 575 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms