RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 SUMO3P55854 103 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-225ENST00000483495 RAB15P59190 212 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 ERVK-25P63136 954 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 ACTC1P68032 377 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 ACTA1P68133 377 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 IL10RAQ13651 578 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 SLC35D3Q5M8T2 416 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 PLA2G2CQ5R387 149 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 VASNQ6EMK4 673 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 TUBA3EQ6PEY2 450 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 LYPD8Q6UX82 237 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 GRINAQ7Z429 371 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 BTLAQ7Z6A9 289 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 C10orf53Q8N6V4 93 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 ARIH2OSQ8N7S6 290 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 POMGNT2Q8NAT1 580 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 OR10H4Q8NGA5 316 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 DUSP19Q8WTR2 217 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 SMPDL3BQ92485 455 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 MED18Q9BUE0 208 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 ISG20L2Q9H9L3 353 aaKnown RBP12.03□□□□□ -0.48
CPNE1-225ENST00000483495 ASB6Q9NWX5 421 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 TAS2R10Q9NYW0 307 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 MYOTQ9UBF9 498 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 YARS2Q9Y2Z4 477 aaKnown RBP12.03□□□□□ -0.48
CPNE1-225ENST00000483495 PEX16Q9Y5Y5 336 aa12.03□□□□□ -0.48
CPNE1-225ENST00000483495 TAF4O00268 1085 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 NUDT14O95848 222 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 MT-ATP6P00846 226 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 GYPBP06028 91 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 ZNF12P17014 697 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 HTR3AP46098 478 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 DIO1P49895 249 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 FABP5Q01469 135 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 ZNF85Q03923 595 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 LGALS3BPQ08380 585 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 C17orf67Q0P5P2 114 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 DBPQ10586 325 aaPredicted RBP12.02□□□□□ -0.48
CPNE1-225ENST00000483495 PCOLCEQ15113 449 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.02□□□□□ -0.48
CPNE1-225ENST00000483495 COL28A1Q2UY09 1125 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 ALG10Q5BKT4 473 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 EMC4Q5J8M3 183 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 LCN1P1Q5VSP4 162 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 ADGRG3Q86Y34 549 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 ATP6V1C2Q8NEY4 427 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 ELP5Q8TE02 316 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 THAP3Q8WTV1 239 aaPredicted RBP12.02□□□□□ -0.48
CPNE1-225ENST00000483495 TMEM203Q969S6 136 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 C1GALT1C1Q96EU7 318 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 NMNAT3Q96T66 252 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 PTDSS2Q9BVG9 487 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 NDEL1Q9GZM8 345 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 C6orf62Q9GZU0 229 aaPredicted RBP12.02□□□□□ -0.48
CPNE1-225ENST00000483495 KLHL1Q9NR64 748 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 GPN3Q9UHW5 284 aaPredicted RBP12.02□□□□□ -0.48
CPNE1-225ENST00000483495 NOX1Q9Y5S8 564 aa12.02□□□□□ -0.48
CPNE1-225ENST00000483495 SPEGQ15772 3267 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 TMED7-TICAM2A0A0A6YYA0 188 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 OR6C68A6NDL8 312 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 ANKUB1A6NFN9 424 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 GMFGO60234 142 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 KLF7O75840 302 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-225ENST00000483495 WISP1O95388 367 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 UMODP07911 640 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 CELP19835 753 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 CD40LGP29965 261 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 AVPR2P30518 371 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 SDHAP31040 664 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 TMED10P49755 219 aaKnown RBP12.02□□□□□ -0.49
CPNE1-225ENST00000483495 RORCP51449 518 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 SLC25A1P53007 311 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 RPL18Q07020 188 aaKnown RBP12.02□□□□□ -0.49
CPNE1-225ENST00000483495 CRTC2Q53ET0 693 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-225ENST00000483495 C22orf42Q6IC83 251 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 FAM199XQ6PEV8 388 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-225ENST00000483495 C5orf46Q6UWT4 87 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 NANOGNBQ7Z5D8 188 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 KLBQ86Z14 1044 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 GPALPP1Q8IXQ4 340 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 ZFP41Q8N8Y5 198 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 STK35Q8TDR2 534 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 RHBDD1Q8TEB9 315 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 ST8SIA1Q92185 356 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 PMEPA1Q969W9 287 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 RASD2Q96D21 266 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 KCTD7Q96MP8 289 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 TM9SF2Q99805 663 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 BARHL1Q9BZE3 327 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 ULBP3Q9BZM4 244 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 WDR70Q9NW82 654 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 TMED7Q9Y3B3 224 aa12.02□□□□□ -0.49
CPNE1-225ENST00000483495 IGLV3-32A0A0A0MS00 114 aa12.01□□□□□ -0.49
CPNE1-225ENST00000483495 TEX13CA0A0J9YWL9 993 aa12.01□□□□□ -0.49
CPNE1-225ENST00000483495 PNMA8CA0A1B0GUJ8 204 aa12.01□□□□□ -0.49
CPNE1-225ENST00000483495 TMEM72A0PK05 275 aa12.01□□□□□ -0.49
CPNE1-225ENST00000483495 LNP1A1A4G5 178 aa12.01□□□□□ -0.49
CPNE1-225ENST00000483495 A8MVM7 634 aa12.01□□□□□ -0.49
CPNE1-225ENST00000483495 C9J4A7 227 aa12.01□□□□□ -0.49
CPNE1-225ENST00000483495 ETV2O00321 342 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms