RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 MBD3L4A6NDZ8 208 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-224ENST00000483359 MBD3L3A6NE82 208 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-224ENST00000483359 MBD3L5A6NJ08 208 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-224ENST00000483359 RAMP1O60894 148 aa15.94■□□□□ 0.14
CPNE1-224ENST00000483359 CH25HO95992 272 aa15.94■□□□□ 0.14
CPNE1-224ENST00000483359 HOXD4P09016 255 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-224ENST00000483359 RBM34P42696 430 aaKnown RBP15.94■□□□□ 0.14
CPNE1-224ENST00000483359 ACTR3P61158 418 aa15.94■□□□□ 0.14
CPNE1-224ENST00000483359 SLC35A1P78382 337 aa15.94■□□□□ 0.14
CPNE1-224ENST00000483359 MYO7BQ6PIF6 2116 aa15.94■□□□□ 0.14
CPNE1-224ENST00000483359 C5orf46Q6UWT4 87 aa15.94■□□□□ 0.14
CPNE1-224ENST00000483359 NRMQ8IXM6 262 aa15.94■□□□□ 0.14
CPNE1-224ENST00000483359 MBD3L2Q8NHZ7 208 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-224ENST00000483359 WNT2BQ93097 391 aa15.94■□□□□ 0.14
CPNE1-224ENST00000483359 INTS12Q96CB8 462 aaKnown RBP15.94■□□□□ 0.14
CPNE1-224ENST00000483359 DENND2DQ9H6A0 471 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-224ENST00000483359 CCM2LQ9NUG4 571 aaPredicted RBP15.94■□□□□ 0.14
CPNE1-224ENST00000483359 SLC5A6Q9Y289 635 aa15.94■□□□□ 0.14
CPNE1-224ENST00000483359 TRAPPC4Q9Y296 219 aa15.94■□□□□ 0.14
CPNE1-224ENST00000483359 ZNF175Q9Y473 711 aa15.94■□□□□ 0.14
CPNE1-224ENST00000483359 PHF3Q92576 2039 aaKnown RBP15.94■□□□□ 0.14
CPNE1-224ENST00000483359 A0A1W2PRQ8 180 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 FTCDNL1E5RQL4 147 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 CST1P01037 141 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 IL2RAP01589 272 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 AGFG1P52594 562 aaKnown RBP15.93■□□□□ 0.14
CPNE1-224ENST00000483359 LTBQ06643 244 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 DGCR6Q14129 220 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 SEC23BQ15437 767 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 PODNL1Q6PEZ8 512 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 TMEM99Q8N816 258 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 MFSD8Q8NHS3 518 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 RNF128Q8TEB7 428 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 ACOT11Q8WXI4 607 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-224ENST00000483359 VNN3Q9NY84 501 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 FLNCQ14315 2725 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 A0A0G2JNJ9 132 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 M0R082 166 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 OR2T1O43869 369 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 TIPRLO75663 272 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 PLGP00747 810 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-224ENST00000483359 BGLAPP02818 100 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 FCGR2AP12318 317 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 IFI30P13284 250 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 GRPRP30550 384 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 ADORA2A-AS1P86434 159 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 LAPTM4AQ15012 233 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 OTUD3Q5T2D3 398 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-224ENST00000483359 OR2T5Q6IEZ7 315 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 RRM2BQ7LG56 351 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 CCDC71Q8IV32 467 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-224ENST00000483359 LRRC17Q8N6Y2 441 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 OR2T29Q8NH02 315 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 ZNF417Q8TAU3 575 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 PYDC1Q8WXC3 89 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 RND1Q92730 232 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 DHRS1Q96LJ7 313 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 HS6ST2Q96MM7 605 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 ZNF587Q96SQ5 575 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-224ENST00000483359 TM9SF2Q99805 663 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 SLC19A3Q9BZV2 496 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 KLHL4Q9C0H6 718 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 RNF122Q9H9V4 155 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 Q9UFV3 132 aa15.93■□□□□ 0.14
CPNE1-224ENST00000483359 DOCK7Q96N67 2140 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 ZG16O60844 167 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 FUT1P19526 365 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 FOXF2Q12947 444 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 ZNF74Q16587 644 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 EXOC3L2Q2M3D2 409 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 TMEM211Q6ICI0 200 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 PAQR6Q6TCH4 344 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 GPAT4Q86UL3 456 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 MCEMP1Q8IX19 187 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 ZNF775Q96BV0 537 aaPredicted RBP15.92■□□□□ 0.14
CPNE1-224ENST00000483359 ALPK1Q96QP1 1244 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 ANKRD19PQ9H560 264 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 SAMHD1Q9Y3Z3 626 aaKnown RBP15.92■□□□□ 0.14
CPNE1-224ENST00000483359 LYVE1Q9Y5Y7 322 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 MED12LQ86YW9 2145 aa15.92■□□□□ 0.14
CPNE1-224ENST00000483359 TNFRSF11BO00300 401 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 GNGT2O14610 69 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 EIF1BO60739 113 aaKnown RBP15.91■□□□□ 0.14
CPNE1-224ENST00000483359 ENTPD5O75356 428 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 TIMP3P35625 211 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 GPR4P46093 362 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 SIRPAP78324 504 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 MBOAT2Q6ZWT7 520 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 KDM8Q8N371 416 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 CNEP1R1Q8N9A8 125 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 OR4K5Q8NGD3 323 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 REEP1Q9H902 201 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 NANSQ9NR45 359 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 DNPH1O43598 174 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 AGFG2O95081 481 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 TMIGD3P0DMS9 266 aaPredicted RBP15.91■□□□□ 0.14
CPNE1-224ENST00000483359 IST1P53990 364 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 SMIM11AP58511 58 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 H3F3AP84243 136 aa15.91■□□□□ 0.14
CPNE1-224ENST00000483359 IL1RL1Q01638 556 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms